bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
REACTOME_RESOLUTION_OF_AP_SITES_VIA_THE_MULTIPLE_NUCLEOTIDE_PATCH_REPLACEMENT_PATHWAY
(Pathway_337)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
PCNA 2 -0.730 0.380 0.679 1.154 0.572 0.718 0.782
TDG 1 1.400 -0.150
POLD1 0 1.600 -1.300 -0.932 0.362 0.283
POLD1 0 1.600 -1.300
NTHL1 0 0.810 -0.080 1.191 1.167
POLD3 0 -0.343
APEX1 0 0.630 -0.180 -0.057 -0.077
MPG 0 0.710 -0.165 0.525
LIG1 0 0.370 -0.580
POLD2 0 -0.020 0.200 0.123
OGG1 0 -0.290 1.020
CCNO 0 -0.720 0.660
FEN1 0 -1.360 2.210 0.895 1.036 -1.389 -0.361 -0.414

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
APEX1 Ubiquitylation K25 -0.227 _GAVAEDGDELRTEPEAKK(gl)_
APEX1 Ubiquitylation K58 -0.215 _TSPSGK(gl)PATLK_
CCNO Phosphorylation S81 -0.913 _GGS(ph)PLPGPAQPVAQLDLQTFR_
FEN1 Ubiquitylation K354 1.109 _VTGSLSSAK(gl)R_
LIG1 Phosphorylation S49 0.101 _EWNGVVSES(ph)DSPVK_
LIG1 Phosphorylation S51 0.145 -0.066 _EWNGVVSESDS(ph)PVK_
LIG1 Phosphorylation S66 0.671 0.408 _VLGS(ph)EGEEEDEALSPAK_
LIG1 Phosphorylation S76 -0.083 0.108 _VLGSEGEEEDEALS(ph)PAK_
LIG1 Phosphorylation S88 1.273 _GQKPALDCS(ph)QVSPPRPATSPENNASLSDTSPMDSSPSGIPK_
LIG1 Phosphorylation S141 0.697 0.877 _TIQEVLEEQS(ph)EDEDREAK_
LIG1 Phosphorylation T182 -0.768 -0.709 _EGEDGDQPT(ph)TPPKPLK_
LIG1 Phosphorylation T183 -0.923 -0.825 _EGEDGDQPTT(ph)PPKPLK_
LIG1 Phosphorylation T195 0.021 0.224 _AET(ph)PTESVS(ph)EPEVATK_
LIG1 Phosphorylation T197 0.441 0.125 _AETPT(ph)ESVSEPEVATK_
LIG1 Phosphorylation S199 0.721 _AET(ph)PTES(ph)VSEPEVATK_
LIG1 Phosphorylation S201 -0.213 0.070 _AET(ph)PTESVS(ph)EPEVATK_
MPG Ubiquitylation K80 0.035 _SIYFSSPK(gl)GHLTR_
MPG Ubiquitylation K210 -0.782 _VLK(gl)DRELCSGPSK_
OGG1 Ubiquitylation K289 -2.026 _DYSWHPTTSQAK(gl)GPSPQTNK_
PCNA Ubiquitylation K13 0.209 2.207 _LVQGSILK(gl)K_
PCNA Ubiquitylation K14 0.233 2.833 _LVQGSILKK(gl)_
PCNA Ubiquitylation K80 0.570 1.579 _ILK(gl)CAGNEDIITLR_
PCNA Ubiquitylation K164 2.309 2.671 _DLSHIGDAVVISCAK(gl)DGVK_
PCNA Ubiquitylation K168 2.484 2.645 _DLSHIGDAVVISCAKDGVK(gl)_
PCNA Ubiquitylation K248 0.226 0.515 _IADMGHLK(gl)YYLAPK_
POLD1 Ubiquitylation K414 -1.315 _AQTLK(gl)VQTFPFLGR_
POLD1 Ubiquitylation K439 -1.108 _DSSFQSK(gl)QTGRR_
POLD1 Ubiquitylation K447 -1.286 _DTK(gl)VVSMVGR_
POLD1 Ubiquitylation K554 -0.798 _GQQVK(gl)VVSQLLR_
POLD1 Ubiquitylation K674 -1.082 -1.843 _TPTGDEFVK(gl)TSVR_
POLD1 Ubiquitylation K758 -0.638 _TK(gl)QLVESK_
POLD1 Ubiquitylation K853 -0.080 -1.776 _MDCK(gl)GLEAVR_
POLD1 Ubiquitylation K911 -0.089 -0.915 _IDISQLVITK(gl)ELTR_
POLD1 Ubiquitylation K923 -2.496 _AASDYAGK(gl)QAHVELAER_
POLD1 Ubiquitylation K1033 0.475 -0.930 _VGGLLAFAK(gl)R_
POLD1 Ubiquitylation K1065 -0.208 _ESELYQK(gl)EVSHLNALEER_
POLD2 Phosphorylation S15 -1.104 _AHTLLS(ph)PPSANNATFAR_
POLD2 Ubiquitylation K81 -0.936 _AQQHWGSGVGVKK(gl)_
POLD2 Ubiquitylation K145 0.215 _LK(gl)GTIDVSK_
POLD2 Ubiquitylation K267 -0.443 -0.428 _K(gl)TQAASVEAVK_
POLD3 Phosphorylation S307 0.831 0.828 _VALS(ph)DDETKETENMR_
TDG Ubiquitylation K103 0.728 _ITDTFK(gl)VKR_
TDG Ubiquitylation K105 1.500 _ITDTFKVK(gl)_
TDG Ubiquitylation K201 -0.531 0.797 _TTPGSK(gl)DLSSK(gl)EFR_
TDG Ubiquitylation K206 0.334 1.024 _TTPGSK(gl)DLSSK(gl)EFR_
TDG Ubiquitylation K218 1.203 _ILVQK(gl)LQK_
TDG Ubiquitylation K221 1.524 _LQK(gl)YQPR_
TDG Ubiquitylation K246 0.699 1.949 _EVFGVK(gl)VK_
TDG Ubiquitylation K285 1.047 _AQDK(gl)VHYYIK_
TDG Ubiquitylation K293 1.411 _LK(gl)DLRDQLK_
TDG Ubiquitylation K300 0.980 _DQLK(gl)GIER_


© Copyright Svejstrup Laboratory 2015