bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Category

Results for the Category
REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL
(Pathway_1218)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
CXADR 1 -0.550 1.230 0.333 1.691
VCAM1 1 1.250 -0.880 -0.412 -0.373
HLA-B 1 0.000 -0.310 0.604 0.718
HLA-B 1 0.000 -0.310 -0.626
HLA-B 1 0.000 -0.310 1.149
HLA-B 1 0.000 -0.310
HLA-B 1 0.000 -0.310
CDH1 0 0.150 0.280 -0.623
PVR 0 1.900 -1.110 -0.185 -0.149
CD81 0 0.850 -0.400 0.408 0.204
PVRL2 0 -0.940 1.620 0.748 -0.029
ITGB1 0 0.390 -0.650 0.101 -0.036
IFITM1 0 0.560 -0.530
IFITM1 0 1.200 -0.770
HLA-C 0 0.604 0.718
HLA-C 0
HLA-C 0
HLA-A 0 0.790 -0.840 -0.626
HLA-C 0 -0.626
HLA-F 0 0.020 -0.190 -0.626
HLA-G 0 0.000 0.140 -0.626
HLA-A 0 0.790 -0.840 1.149
HLA-C 0 1.149
HLA-A 0 0.790 -0.840

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CD81 Ubiquitylation K182 -2.166 _QFYDQALQQAVVDDDANNAK(gl)AVVK_
CXADR Phosphorylation S332 -0.817 -0.804 _TPQS(ph)PTLPPAK_
HLA-A Ubiquitylation K92 -0.349 _NVK(gl)AQSQTDRVDLGTLR_
HLA-A Ubiquitylation K168 0.549 _SWTAADMAAQITK(gl)R_
HLA-A Ubiquitylation K346 -0.072 -0.211 _K(gl)GGSYTQAASSDSAQGSDVSLTACK(gl)V_
HLA-A Ubiquitylation K370 0.345 0.434 _K(gl)GGSYTQAASSDSAQGSDVSLTACK(gl)V_
HLA-B Ubiquitylation K177 -0.088 _YLENGKDK(gl)LER_
HLA-B Ubiquitylation K267 -0.118 _TFQK(gl)WAAVVVPSGEEQR_
HLA-C Ubiquitylation K120 -0.876 _GYDQSAYDGK(gl)DYIALNEDLR_
HLA-C Ubiquitylation K341 -0.900 -0.092 _SSGGK(gl)GGSCSQAACSNSAQGSDESLITCK_
IFITM1 Ubiquitylation K3 -0.716 -1.338 _M(ox)HK(gl)EEHEVAVLGPPPSTILPR_
ITGB1 Ubiquitylation K774 0.402 _MNAK(gl)WDTGENPIYK_
ITGB1 Ubiquitylation K784 -0.172 0.350 _WDTGENPIYK(gl)SAVTTVVNPK_
ITGB1 Ubiquitylation K794 0.755 0.604 _SAVTTVVNPK(gl)YEGK_
PVRL2 Phosphorylation T410 -1.005 _EQTLQGAEEDEDLEGPPSYKPPT(ph)PK_
PVRL2 Phosphorylation S430 0.026 _LEAQEMPSQLFTLGAS(ph)EHSPLK_
PVRL2 Phosphorylation S433 -0.325 _LEAQEMPSQLFTLGASEHS(ph)PLK_
VCAM1 Ubiquitylation K263 0.419 -0.113 _STLQIGK(gl)R_
VCAM1 Phosphorylation S276 0.013 _RDANSSFFDNSSS(ph)PHLLDQLK_
VCAM1 Ubiquitylation K293 -0.460 _NK(gl)INELELR_
VCAM1 Ubiquitylation K326 -0.856 _FQELQLQLEKAK(gl)_
VCAM1 Ubiquitylation K513 -1.965 _NIK(gl)QCLNQSQNFAEEMK_
VCAM1 Ubiquitylation K555 -0.739 -0.237 _INQQENSLTLEK(gl)LK_
VCAM1 Ubiquitylation K606 0.112 _ALLSALELKK(gl)_
VCAM1 Ubiquitylation K657 -0.600 0.172 _TQQIK(gl)SHEYNER_
VCAM1 Ubiquitylation K689 -0.011 _NLHNVLDSK(gl)SVEVETQK_
VCAM1 Ubiquitylation K770 -1.636 -0.056 _SK(gl)DASLVTNEDHQR_
VCAM1 Ubiquitylation K823 -1.207 -0.686 _LEADQSPK(gl)NSAILQNR_
VCAM1 Phosphorylation S834 1.282 _VDS(ph)LEFSLESQK_
VCAM1 Ubiquitylation K1022 -0.770 _SISELSDQYKQEK(gl)_
VCAM1 Phosphorylation S1255 2.400 _GDLETSNLQDMQS(ph)QEISGLKDCEIDAEEK_
VCAM1 Phosphorylation S1747 -0.145 _LQLQGLDLS(ph)SR_
VCAM1 Phosphorylation S1750 -1.171 -0.117 _S(ph)LLGIDTEDAIQGR_
VCAM1 Phosphorylation T1825 -0.475 _ITETGAVKPTGECSGEQSPDT(ph)NYEPPGEDK_
VCAM1 Ubiquitylation K2069 -0.699 _GELDTMSKK(gl)_
VCAM1 Ubiquitylation K2713 0.058 _MTAK(gl)ETELQR_
VCAM1 Ubiquitylation K2739 -1.524 _TAELQEELSGEK(gl)NR_
VCAM1 Phosphorylation S2996 -1.047 -1.005 _GS(ph)PLLGPVVPGPS(ph)PIPSVTEK_
VCAM1 Phosphorylation S3007 -0.910 -2.059 _GS(ph)PLLGPVVPGPS(ph)PIPSVTEK_
VCAM1 Phosphorylation S3119 -0.975 -0.328 _LALS(ph)PLSLGK_
VCAM1 Phosphorylation S3150 1.391 1.078 _VAQRS(ph)PVDSGTILR_
VCAM1 Phosphorylation S3175 1.052 0.884 _SVPVNNLPERS(ph)PTDSPR_


.

© Copyright Svejstrup Laboratory 2015