bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Category

Results for the Category
LisH_dimerisation
(IPR006594)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
TCOF1 3 -1.970 3.410 -0.231 -0.248
TCOF1 3 -1.970 3.410 0.562 0.635 0.077 0.240
SMU1 2 -2.320 4.100 -0.497 -0.559 0.627 -0.536 -0.034
SMU1 2 -0.600 0.320 -0.497 -0.559 0.627 -0.536 -0.034
NPAT 2 1.890 -0.890 -0.100 -0.144
PAFAH1B1 1 0.820 -0.330 1.632 0.711
RANBP9 1 0.090 -0.350 -1.301 0.345
TBL1Y 1 -1.630 3.050 0.090 -3.400 0.909 0.103 0.241
GID8 1 -1.520 2.690
FGFR1OP 1 -0.600 0.800
OFD1 0 1.920 -1.210 -0.269
MAEA 0 -0.140 0.200
TBL1X 0 -0.240 -0.140 0.090 -3.400 0.909 0.103 0.241
MKLN1 0 -0.010 0.330
SSBP4 0 -0.350 0.720
KIAA1468 0 1.050 -0.820
RANBP10 0 0.990 -0.810
RMND5B 0 -0.500 0.050
TAF5 0 1.390 -1.390 -2.311 0.004 0.398 1.017 0.674
RMND5A 0 -1.180 1.330
SSBP3 0 0.330 -0.740
WDR26 0 0.360 0.610 0.106 -0.442 0.487 0.260 -0.351
NOLC1 0 -1.155 0.739 0.034 -0.229
KATNAL2 0 -0.870 0.930 -1.083 0.236 -1.224 -0.685 -0.367
TBL1XR1 0 -0.370 0.750 0.090 -3.400 0.909 0.103 0.241

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
FGFR1OP Phosphorylation S156 -0.647 -0.663 _EKGPTTGEGALDLSDVHS(ph)PPKS(ph)PEGK_
FGFR1OP Phosphorylation S160 -0.079 -0.321 _EKGPTTGEGALDLSDVHS(ph)PPKS(ph)PEGK_
FGFR1OP Phosphorylation T170 -0.492 -1.069 _TSAQTT(ph)PSKIPR_
FGFR1OP Phosphorylation S326 1.712 _IGS(ph)LGLGTGEDDDYVDDFNSTSHR_
GID8 Ubiquitylation K191 -0.079 -0.015 _ESTPK(gl)LAK_
KIAA1468 Phosphorylation S56 0.941 0.359 _LGAGSGLDPGSAGSLS(ph)PQDPVALGSSAR_
KIAA1468 Phosphorylation S180 0.489 0.793 _AGS(ph)ISTLDSLDFAR_
KIAA1468 Phosphorylation S453 -0.773 0.078 _ENS(ph)PNSFPR_
MAEA Ubiquitylation K31 -0.051 -0.270 _VPYETLNK(gl)R_
MAEA Ubiquitylation K100 0.293 _AVESIQAEDESAKLCK(gl)R_
MAEA Ubiquitylation K144 -0.868 _CGYYNTAVK(gl)LAR_
MAEA Ubiquitylation K342 -1.175 _TPQCYK(gl)EDGSSKSPDCPVCSR_
MKLN1 Ubiquitylation K260 -0.363 -0.383 _STK(gl)GDGEDNRPGMR_
NOLC1 Ubiquitylation K33 -0.497 0.663 _DNQLSEVANK(gl)FAK_
NOLC1 Phosphorylation T188 -1.587 _IT(ph)PVTVK_
NOLC1 Ubiquitylation K193 -0.477 0.741 _ITPVTVK(gl)AQTK_
NOLC1 Phosphorylation S397 -1.993 -0.907 _S(ph)PAVKPAAAPK_
NOLC1 Phosphorylation S508 -1.637 -0.451 _VAGGAAPSKPAS(ph)AKK_
NOLC1 Phosphorylation S538 -0.161 -0.182 _GS(ph)PRPQAPK_
NOLC1 Phosphorylation S563 0.992 0.699 _AAKNS(ph)EEEEEEKK_
NOLC1 Phosphorylation T607 -1.213 -0.528 _LQT(ph)PNT(ph)FPK_
NOLC1 Phosphorylation T610 -1.910 -0.781 _LQT(ph)PNT(ph)FPK_
NOLC1 Phosphorylation S643 -0.811 0.017 _VADNS(ph)FDAKR_
NOLC1 Ubiquitylation K647 1.138 _VADNSFDAK(gl)R_
NOLC1 Phosphorylation S693 0.871 _GGSISVQVNS(ph)IKFDSE_
NOLC1 Phosphorylation S698 0.979 0.600 _GGSISVQVNSIKFDS(ph)E_
NPAT Phosphorylation S1151 1.822 1.879 _KVS(ph)PTEIVLESFHK_
NPAT Phosphorylation T1153 1.781 _KVSPT(ph)EIVLESFHK_
OFD1 Ubiquitylation K218 0.010 _AEMCQK(gl)LK_
OFD1 Ubiquitylation K256 -0.642 _ACQAK(gl)SEALVLR_
OFD1 Ubiquitylation K533 -0.930 _ASVK(gl)SLTTQVADLK_
OFD1 Phosphorylation S669 -0.349 -0.888 _S(ph)PPSLHLLEAFK_
OFD1 Phosphorylation S735 0.482 -0.458 _RLS(ph)STPLPK_
OFD1 Phosphorylation S762 -0.735 -0.990 _SHIAS(ph)PSPCPDR_
OFD1 Phosphorylation S774 -0.145 -0.111 _MPLPS(ph)PTESR_
OFD1 Phosphorylation S788 -0.298 _HSLSIPPVS(ph)SPPEQK_
OFD1 Phosphorylation S789 -0.909 _HSLSIPPVSS(ph)PPEQK_
OFD1 Phosphorylation S899 -0.092 _RQS(ph)NLQEVLER_
PAFAH1B1 Ubiquitylation K76 -0.530 _LNEAK(gl)EEFTSGGPLGQK_
RANBP10 Phosphorylation S361 -0.043 _SQDS(ph)YPGSPSLSPR_
RANBP10 Phosphorylation S369 0.270 0.128 _SQDSYPGSPSLS(ph)PR_
RANBP9 Ubiquitylation K197 -0.979 -0.346 _TPK(gl)DAASVR_
RANBP9 Ubiquitylation K405 2.354 1.207 _STDQTVLEELASIK(gl)NR_
RANBP9 Ubiquitylation K445 -0.136 _NPNLLFTLK(gl)_
RMND5A Ubiquitylation K165 -0.124 _ILEALK(gl)VR_
RMND5A Ubiquitylation K371 -0.192 _MFNGSK(gl)LK_
RMND5B Ubiquitylation K91 -0.597 _VGK(gl)AIDR_
SMU1 Ubiquitylation K194 1.054 _AAVK(gl)DVEEEKFPTQLSR_
SMU1 Ubiquitylation K214 1.900 0.288 _FGQK(gl)SHVECAR_
SMU1 Ubiquitylation K287 -0.282 _DTEMLATGAQDGK(gl)IK_
SMU1 Ubiquitylation K289 -0.282 _DTEMLATGAQDGK(gl)IK_
SMU1 Ubiquitylation K308 2.674 _AHSK(gl)GVTCLSFSK_
SMU1 Ubiquitylation K337 2.033 _IHGLK(gl)SGK_
SMU1 Ubiquitylation K340 1.885 _IHGLKSGK(gl)_
SMU1 Ubiquitylation K379 2.016 0.354 _IWNMK(gl)TTECSNTFK_
SSBP3 Ubiquitylation K6 -1.655 -0.644 _GK(gl)GSAVPSDGQAR_
SSBP3 Phosphorylation S347 -0.872 _NS(ph)PNNISGISNPPGTPR_
SSBP4 Phosphorylation S341 -1.172 -1.418 _S(ph)SPGAVAGLSNAPGTPR_
SSBP4 Phosphorylation S342 -1.463 -1.418 _SS(ph)PGAVAGLSNAPGTPR_
SSBP4 Phosphorylation T355 0.632 -1.208 _SS(ph)PGAVAGLSNAPGT(ph)PR_
TAF5 Ubiquitylation K318 0.476 0.385 _DSYQLLK(gl)R_
TBL1X Ubiquitylation K102 -0.183 _DK(gl)LAQQQAAAAAAAAAAASQQGSAK_
TBL1XR1 Ubiquitylation K102 -0.183 _DK(gl)LAQQQAAAAAAAAAAASQQGSAK_
TBL1Y Ubiquitylation K102 -0.183 _DK(gl)LAQQQAAAAAAAAAAASQQGSAK_
TCOF1 Phosphorylation S153 0.017 0.008 _TVANLLS(ph)GKSPRK_
TCOF1 Phosphorylation S156 -0.143 -0.271 _TVANLLSGKS(ph)PR_
TCOF1 Phosphorylation T168 -0.150 -0.291 _SAEPSANTT(ph)LVSETEEEGSVPAFGAAAK_
TCOF1 Phosphorylation S171 -0.009 -0.319 _SAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK_
TCOF1 Phosphorylation T173 -0.095 -0.774 _KSAEPSANTTLVSET(ph)EEEGSVPAFGAAAK_
TCOF1 Phosphorylation S178 -0.673 _KSAEPSANTTLVSETEEEGS(ph)VPAFGAAAK_
TCOF1 Phosphorylation S229 0.299 0.206 _ASSVS(ph)TKESPARK_
TCOF1 Phosphorylation T230 0.667 _ASSVST(ph)KESPARK_
TCOF1 Phosphorylation S233 0.678 0.440 _ASSVSTKES(ph)PARK_
TCOF1 Phosphorylation T249 -0.318 -0.148 _VGDVT(ph)PQVK_
TCOF1 Phosphorylation S375 0.402 0.388 _TSQVGAAS(ph)APAKESPR_
TCOF1 Phosphorylation S381 0.138 -0.097 _AASAPAKES(ph)PRK_
TCOF1 Phosphorylation S503 -0.705 -0.696 _S(ph)PQVKPASTMGMGPLGK_
TCOF1 Phosphorylation T533 -0.351 -0.618 _VGPAT(ph)PSAQVGK_
TCOF1 Phosphorylation T581 -0.867 -1.151 _SLGNILQAKPT(ph)SSPAKGPPQK_
TCOF1 Phosphorylation S582 -0.697 -1.210 _SLGNILQAKPTS(ph)SPAKGPPQK_
TCOF1 Phosphorylation S583 -0.585 -0.527 _PTSS(ph)PAKGPPQK_
TCOF1 Phosphorylation S906 -0.124 -0.506 _AALAPAKES(ph)PRK_
TCOF1 Phosphorylation T914 -0.746 -0.672 _KGAAPT(ph)PPGK_
TCOF1 Phosphorylation S1004 -0.550 -0.134 _S(ph)PAGPAATPAQAQAASTPR_
TCOF1 Phosphorylation S1019 -1.826 -2.344 _SPAGPAATPAQAQAAS(ph)TPR_
TCOF1 Phosphorylation T1020 -1.928 -2.528 _SPAGPAATPAQAQAAST(ph)PR_
TCOF1 Phosphorylation S1110 -0.328 -0.294 _KQEGPATQVDSAVGTLPATS(ph)PQSTSVQAK_
TCOF1 Phosphorylation S1148 -0.197 -0.145 _TQPSSGVDSAVGTLPATS(ph)PQSTSVQAK_
TCOF1 Phosphorylation S1264 0.678 0.451 _LDS(ph)SPSVSSTLAAK_
TCOF1 Phosphorylation S1265 0.630 0.536 _LDSS(ph)PSVSSTLAAK_
TCOF1 Phosphorylation S1294 -0.196 0.220 _QEAKPQQAAGMLS(ph)PK_
TCOF1 Phosphorylation S1387 0.202 0.572 _RKLS(ph)GDQPAAR_
TCOF1 Phosphorylation S1413 0.285 _LGAGEGGEAS(ph)VSPEKTSTTSK_
TCOF1 Phosphorylation S1415 0.408 0.363 _KLGAGEGGEASVS(ph)PEK_
TCOF1 Phosphorylation S1444 2.608 -0.001 _GKGS(ph)LGSQGAKDEPEEELQK_
TCOF1 Phosphorylation S1447 2.418 2.296 _GSLGS(ph)QGAKDEPEEELQK_
WDR26 Phosphorylation S121 0.836 0.872 _RLS(ph)QSDEDVIR_
WDR26 Ubiquitylation K162 -0.209 -0.848 _LEHPSATK(gl)FR_
WDR26 Ubiquitylation K244 0.577 -0.131 _CELTPLK(gl)YNTER_
WDR26 Ubiquitylation K274 -0.679 _AEWEGK(gl)GTASR_
WDR26 Ubiquitylation K369 0.852 _FSNDGTK(gl)LATGSK_
WDR26 Ubiquitylation K459 -1.153 _MSQSHEDSLTSVAWNPDGK(gl)R_


.

© Copyright Svejstrup Laboratory 2015