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Query: SSBP3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SSBP3 0 -3.171 0.330 -0.740

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SSBP3 Ubiquitylation K6 -1.655 -0.644 _GK(gl)GSAVPSDGQAR_
SSBP3 Phosphorylation S347 -0.872 _NS(ph)PNNISGISNPPGTPR_

Background Information for SSBP3:


Pubmed-SSBP3 »
Uniprot-SSBP3 »
Biogrid-SSBP3 »
ProteomicsDB-SSBP3 »

Tumorportal-SSBP3 »
COSMIC-SSBP3 »
GenomeRNAi-SSBP3 »
Genecards-SSBP3


Protein-protein Interactions for SSBP3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait IDI2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LHX6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LHX9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LMO2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LMX1B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SSBP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SSBP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SSBP4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SSBP3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SSDP_DNA-bd IPR008116 0.08
Category members LisH_dimerisation IPR006594 0.06


Protein complexes (CORUM database) featuring SSBP3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SSBP3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003697 single-stranded DNA binding Database 4.24
Category members GO Category GO:0043234 protein complex Database 2.73
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0060323 head morphogenesis Database 0.68
Category members GO Category GO:0043066 negative regulation of apoptotic process Database 0.6
Category members GO Category GO:0006461 protein complex assembly Database 0.57
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0060322 head development Database 0.27
Category members GO Category GO:0045944 positive regulation of transcription from RNA polymerase II promoter Database 0.13
Category members GO Category GO:0008284 positive regulation of cell proliferation Database 0


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