RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
USP14	1	-0.120	1.090	-0.442			3.486
USP14	1	-0.120	1.090
UCHL5	1	0.080	0.070
UCHL5	1	0.080	0.070	0.053	-0.539	0.136
PKD1	0	-0.900	0.980
PRKACA	0	0.380	-0.680		-1.005	-0.697	0.234	0.487
PSMD14	0			-0.108	-0.655	0.117	-0.121	-0.010
PSME3	0	0.190	0.530	-0.215		-0.401
TMF1	0	1.240	-1.110				0.028	0.252
BTRC	0	-0.780	0.690	0.532			-1.791	0.313

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BTRC	Ubiquitylation	K466		0.325	_IVSGAYDGKIK(gl)_
PKD1	Phosphorylation	T867		0.841	_GT(ph)YHVRLEVNNTVSGAAAQADVR_
PRKACA	Ubiquitylation	K30	-0.143		_AKEDFLKK(gl)_
PRKACA	Ubiquitylation	K93	0.839	0.714	_QIEHTLNEK(gl)R_
PSMD14	Ubiquitylation	K154	-1.127	0.434	_GK(gl)VVIDAFR_
PSMD14	Ubiquitylation	K253	0.194	-0.255	_EMLELAK(gl)NYNK_
PSMD14	Ubiquitylation	K257	-0.581	-0.994	_NYNK(gl)AVEEEDKMTPEQLAIK_
PSME3	Ubiquitylation	K6	-0.128	0.024	_(ac)ASLLK(gl)VDQEVK_
PSME3	Ubiquitylation	K12	0.437		_VDQEVK(gl)LK_
PSME3	Ubiquitylation	K14	0.149	0.475	_LK(gl)VDSFRER_
PSME3	Phosphorylation	T23		0.446	_IT(ph)SEAEDLVANFFPK_
PSME3	Phosphorylation	S24	-0.264	0.279	_ITS(ph)EAEDLVANFFPK_
PSME3	Ubiquitylation	K37	-0.209		_ITSEAEDLVANFFPKK(gl)_
PSME3	Ubiquitylation	K132	0.536	0.916	_LLIEK(gl)CNTVK_
TMF1	Phosphorylation	S160		-1.216	_DSSLCVS(ph)GETLAAGTSSPK_
TMF1	Phosphorylation	S344	0.779	-0.050	_SVSEINS(ph)DDELSGK_
TMF1	Phosphorylation	S399	-0.276	-0.307	_S(ph)ATPVNCEQPDILVSSTPINEGQTVLDK_
TMF1	Phosphorylation	T401	-0.276	-0.307	_S(ph)ATPVNCEQPDILVSSTPINEGQTVLDK_
UCHL5	Ubiquitylation	K154	0.112	0.468	_QQMFEFDTK(gl)TSAK_
UCHL5	Ubiquitylation	K210	-0.599	0.531	_RIQK(gl)YSEGEIR_
UCHL5	Ubiquitylation	K234	0.086	0.335	_MIYEQK(gl)IAELQR_
UCHL5	Ubiquitylation	K277	0.914		_NQMLIEEEVQK(gl)LKR_
UCHL5	Ubiquitylation	K279	1.986	0.052	_NQMLIEEEVQKLK(gl)_
UCHL5	Ubiquitylation	K315	-0.307		_TLAEHQQLIPLVEK(gl)AK_
UCHL5	Ubiquitylation	K317	-0.037	0.724	_TLAEHQQLIPLVEKAK(gl)_
USP14	Ubiquitylation	K54	-0.506	0.880	_GGTLK(gl)DDDWGNIK_
USP14	Ubiquitylation	K62	-1.110	0.317	_GGTLKDDDWGNIK(gl)IK_
USP14	Ubiquitylation	K130	-0.994	-0.631	_SVPELK(gl)DALKR_
USP14	Ubiquitylation	K134		-0.783	_SVPELKDALK(gl)R_
USP14	Phosphorylation	S143	0.551	0.678	_AS(ph)GEM(ox)ASAQYITAALR_
USP14	Ubiquitylation	K224	-1.522	-1.122	_LEAIEDDSVK(gl)ETDSSSASAATPSK_
USP14	Ubiquitylation	K239	-0.850		_LEAIEDDSVKETDSSSASAATPSKK(gl)_
USP14	Ubiquitylation	K291	-0.258	-0.581	_YLFTGLK(gl)_
USP14	Ubiquitylation	K300	-0.534	-1.071	_LQEEITK(gl)QSPTLQR_
USP14	Ubiquitylation	K313	-0.672	-0.343	_NALYIK(gl)SSK_
USP14	Ubiquitylation	K336	1.000		_FFYK(gl)EKESVNAK_
USP14	Ubiquitylation	K342	-0.361		_ESVNAK(gl)VLK_
USP14	Phosphorylation	S389	-0.018		_VNQQPNTS(ph)DKKSSPQK_
USP14	Phosphorylation	S394		0.259	_VNQQPNTSDKKSS(ph)PQK_
USP14	Ubiquitylation	K441	0.293	-0.492	_SSSSGHYVSWVK(gl)R_