RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
DDX21	2	0.130	-0.120	-0.288	-0.093	0.027	-0.154	0.016
DHX36	2	-2.190	4.200	-0.545	-0.667	-0.353	-1.117	-0.161
RIPK2	1	-1.740	3.580
KCNJ8	1	-2.110	4.400
DDX1	0	-0.100	0.160	-0.034	-0.036	0.487	-0.133	0.258
MAPK3	0
STAT1	0	-0.550	0.170
IRF3	0	-0.190	-0.050
RFTN1	0	0.340	-0.570				0.644
SLC3A2	0	-0.520	0.660	0.690	1.007	-1.149	0.607	0.589

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
DDX1	Ubiquitylation	K82		-0.137	_TTIK(gl)TGASVLNK_
DDX1	Ubiquitylation	K117	1.370		_EVK(gl)EWHGCR_
DDX1	Ubiquitylation	K173	1.499		_FGFGFGGTGKK(gl)_
DDX1	Ubiquitylation	K260	-0.585		_DGFVALSK(gl)APDGYIVK_
DDX1	Ubiquitylation	K281	0.294		_SQHSGNAQVTQTK(gl)FLPNAPK_
DDX1	Ubiquitylation	K358	1.293		_LDDLVSTGK(gl)LNLSQVR_
DDX1	Phosphorylation	S481	0.023	0.050	_DNTRPGANS(ph)PEMWSEAIK_
DDX21	Phosphorylation	S13	0.368	0.556	_SDAGLES(ph)DTAMK_
DDX21	Phosphorylation	S71	-1.693	-0.964	_KKAEPSEVDMNS(ph)PK_
DDX21	Phosphorylation	S89	-0.313	-0.086	_KKEEPSQNDIS(ph)PK_
DDX21	Phosphorylation	S121	-0.428	-0.293	_NEEPS(ph)EEEIDAPKPK_
DDX21	Ubiquitylation	K285	1.226	0.621	_DFSDITK(gl)K_
DDX21	Ubiquitylation	K403	1.118		_STYEQVDLIGKK(gl)_
DDX21	Ubiquitylation	K406	1.732		_TQK(gl)TAITVEHLAIK_
DDX21	Ubiquitylation	K448		0.296	_TIIFCETK(gl)K_
DDX21	Ubiquitylation	K449		0.296	_TIIFCETK(gl)K_
DDX21	Ubiquitylation	K481	1.165	1.547	_EITLK(gl)GFR_
DDX21	Ubiquitylation	K676	1.139		_GMVFLK(gl)GK_
DDX21	Ubiquitylation	K779	0.976	2.093	_SFSK(gl)AFGQ_
DHX36	Phosphorylation	S2	0.179	1.998	_(ac)S(ph)YDYHQNWGR_
DHX36	Ubiquitylation	K862		-1.119	_VYTK(gl)TDGLVAVHPK_
IRF3	Phosphorylation	S173	-0.663	-1.111	_S(ph)PSLDNPTPFPNLGPSENPLK_
IRF3	Phosphorylation	S175	-0.663	-0.661	_S(ph)PSLDNPTPFPNLGPSENPLKR_
IRF3	Ubiquitylation	K193	-3.309	-3.157	_SPSLDNPTPFPNLGPSENPLK(gl)R_
KCNJ8	Ubiquitylation	K48		0.355	_SGACNLAHK(gl)NIR_
KCNJ8	Ubiquitylation	K347		-0.233	_FGNTVK(gl)VAAPR_
MAPK3	Phosphorylation	Y204	-0.807	-2.487	_IADPEHDHTGFLTEY(ph)VATR_
MAPK3	Ubiquitylation	K289		-0.608	_NYLQSLPSKTK(gl)_
RFTN1	Ubiquitylation	K361	1.134	0.497	_K(gl)IQEAASQGLK_
RFTN1	Phosphorylation	S413	0.717	0.101	_GDHAS(ph)LENEKPGTGDVCSAPAGR_
RIPK2	Ubiquitylation	K410	-2.810		_AAFCDHK(gl)TTPCSSAIINPLSTAGNSER_
RIPK2	Phosphorylation	S531	0.884	0.839	_SPS(ph)LNLLQNK_
RIPK2	Ubiquitylation	K538	-2.659		_SPSLNLLQNK(gl)SM_
SLC3A2	Phosphorylation	S103		0.947	_(ac)S(ph)QDTEVDMKEVELNELEPEK_
SLC3A2	Phosphorylation	T106		1.017	_(ac)S(ph)QDTEVDMKEVELNELEPEKQPMNAASGAAMSLAGAEK_
SLC3A2	Ubiquitylation	K145	1.389	0.982	_NGLVK(gl)IK_
SLC3A2	Ubiquitylation	K147	1.147	0.705	_IK(gl)VAEDEAEAAAAAK_
SLC3A2	Ubiquitylation	K160	-0.471		_VAEDEAEAAAAAK(gl)FTGLSK_
SLC3A2	Ubiquitylation	K166	-0.293	0.631	_FTGLSK(gl)EELLK_
STAT1	Phosphorylation	S727	1.377	0.974	_LQTTDNLLPMS(ph)PEEFDEVSR_