bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
spinal cord development
(GO:0021510)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
ERCC2 2 -0.590 1.060 -0.491 1.066
BAG3 1 0.180 -0.820
PKD1 0 -0.900 0.980
PHGDH 0 -0.190 -0.280 0.032 -0.024 -0.302 1.449 0.834
DPYSL2 0
PTPRS 0 0.140 0.270 -0.194 0.365
SOX4 0 1.610 -0.930
SLIT1 0 0.990 -0.510 -3.112 -1.071
NF1 0 1.000 -0.500 0.444 -0.190

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
BAG3 Phosphorylation S173 -0.549 -0.580 _SQS(ph)PAASDCSSSSSSASLPSSGR_
BAG3 Phosphorylation S194 -0.402 -0.523 _S(ph)SLGSHQLPR_
BAG3 Phosphorylation S195 0.244 -0.933 _SS(ph)LGSHQLPR_
BAG3 Phosphorylation S289 4.691 -1.292 _SSTPLHS(ph)PSPIR_
BAG3 Phosphorylation S291 0.973 -1.061 _SSTPLHSPS(ph)PIR_
BAG3 Phosphorylation S377 -2.611 -2.836 _VPPAPVPCPPPS(ph)PGPSAVPSSPK_
BAG3 Phosphorylation S381 -1.826 _VPPAPVPCPPPSPGPS(ph)AVPS(ph)SPK_
BAG3 Phosphorylation S385 -3.389 -1.522 _VPPAPVPCPPPS(ph)PGPSAVPS(ph)SPK_
BAG3 Phosphorylation S386 -3.389 -3.269 _VPPAPVPCPPPS(ph)PGPSAVPSS(ph)PK_
DPYSL2 Phosphorylation T565 -0.253 -0.187 _GLYDGPVCEVSVT(ph)PK_
DPYSL2 Ubiquitylation K567 -1.870 _GLYDGPVCEVSVTPK(gl)TVTPASSAK_
ERCC2 Ubiquitylation K268 5.973 1.957 _CQGNLETLQK(gl)TVLR_
ERCC2 Ubiquitylation K507 -2.034 _GNDQVAISSK(gl)FETR_
NF1 Ubiquitylation K471 0.218 _MAPSLTFKEK(gl)_
NF1 Phosphorylation S864 -0.458 _SNSGLATYS(ph)PPMGPVSER_
NF1 Phosphorylation T2514 0.076 _GSEGYLAATYPTVGQT(ph)SPR_
NF1 Phosphorylation S2515 0.071 0.316 _GSEGYLAATYPTVGQTS(ph)PR_
NF1 Phosphorylation S2543 0.698 0.655 _S(ph)FDHLISDTK_
PHGDH Ubiquitylation K21 0.211 0.538 _K(gl)ILQDGGLQVVEK_
PHGDH Ubiquitylation K58 -0.078 0.489 _SATK(gl)VTADVINAAEK_
PHGDH Ubiquitylation K69 0.277 0.839 _VTADVINAAEK(gl)LQVVGR_
PHGDH Ubiquitylation K289 -0.629 -0.819 _ALVDHENVISCPHLGASTK(gl)EAQSR_
PHGDH Ubiquitylation K351 -0.346 0.413 _AWAGSPK(gl)GTIQVITQGTSLK_
PHGDH Ubiquitylation K384 -0.129 -0.044 _EASK(gl)QADVNLVNAK_
PHGDH Ubiquitylation K394 -0.043 _QADVNLVNAK(gl)LLVK_
PKD1 Phosphorylation T867 0.841 _GT(ph)YHVRLEVNNTVSGAAAQADVR_
PTPRS Ubiquitylation K1650 -0.595 -1.027 _LLASSK(gl)AHTSR_
PTPRS Ubiquitylation K1665 -0.790 _FISANLPCNK(gl)FK_
SLIT1 Ubiquitylation K72 -1.544 _ITK(gl)TDFAGLR_
SLIT1 Ubiquitylation K103 0.625 _GAFQDLK(gl)ELER_
SLIT1 Ubiquitylation K825 0.073 _TFDGLK(gl)SLR_
SOX4 Phosphorylation S354 -0.003 _SSAASSPAAGRS(ph)PADHR_


© Copyright Svejstrup Laboratory 2015