RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CAND1	2	-0.720	0.390	-1.046	1.059	-0.316	0.107	0.156
ERCC1	1	-1.720	3.820
ERCC1	1	-1.460	2.450
PSMC5	1	0.000	-0.100
PSMC5	1	0.000	-0.100	-0.084		0.014	0.198	-0.612
PSMC1	1	-0.370	0.950	-0.345	-0.122	0.523	0.050	0.292
DR1	1	2.770	-1.320
GTF2B	1	0.010	-0.230		-1.841	-0.911
CAND2	1	-1.870	3.010					0.036
TAF1B	0	-0.880	0.740
TAF1	0						0.381	0.385
YEATS2	0	-0.790	1.760	-1.123			-0.045	-0.324
BRF1	0	-0.990	1.780
NACA	0	-0.120	-0.230		0.387	-0.799	-0.094	-0.296

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BRF1	Phosphorylation	T365	0.704	0.482	_DGSTEDTASSLCGEEDT(ph)EDEELEAAASHLNK_
BRF1	Phosphorylation	S450		-0.470	_DASGDGELDLS(ph)GIDDLEIDR_
BRF1	Phosphorylation	S553	0.355	0.122	_GLSSAGGGS(ph)PHREDAQPEHSASAR_
CAND1	Ubiquitylation	K51	0.633		_VVK(gl)MILK_
CAND1	Ubiquitylation	K60	0.342	0.471	_LLEDK(gl)NGEVQNLAVK_
CAND1	Ubiquitylation	K355	1.318	1.197	_AAAK(gl)CLDAVVSTR_
CAND1	Ubiquitylation	K574	0.835	1.669	_DLFTCTIK(gl)R_
CAND1	Ubiquitylation	K577	0.292	0.893	_LK(gl)AADIDQEVKER_
CAND1	Ubiquitylation	K826	1.544		_EGPAVVGQFIQDVK(gl)NSR_
CAND2	Ubiquitylation	K588	0.359	-1.783	_ATDLDQEVK(gl)ER_
DR1	Ubiquitylation	K128	-0.035	0.356	_QQQELFAK(gl)AR_
ERCC1	Ubiquitylation	K162	-0.634		_LQSLGK(gl)NFALR_
ERCC1	Ubiquitylation	K243		-0.245	_VTECLTTVK(gl)SVNK_
ERCC1	Ubiquitylation	K281		-1.586	_EDLALCPGLGPQK(gl)AR_
GTF2B	Ubiquitylation	K59	0.815		_TFSNDK(gl)ATKDPSR_
GTF2B	Phosphorylation	S70	0.024	1.199	_VGDS(ph)QNPLLSDGDLSTMIGK_
GTF2B	Ubiquitylation	K100	0.563		_GTGAASFDEFGNSK(gl)YQNRR_
GTF2B	Ubiquitylation	K149	0.704		_QVYEQK(gl)SLK_
GTF2B	Ubiquitylation	K178	1.874		_TFK(gl)EICAVSR_
NACA	Ubiquitylation	K1941	0.879		_K(gl)AMSKLGLR_
NACA	Ubiquitylation	K1945	0.579		_AMSK(gl)LGLR_
NACA	Ubiquitylation	K1963	-0.781		_K(gl)SKNILFVITKPDVYK_
NACA	Ubiquitylation	K1976	-0.188		_NILFVITKPDVYK(gl)_
NACA	Ubiquitylation	K2005	0.209		_IEDLSQQAQLAAAEK(gl)FK_
NACA	Phosphorylation	T2024	0.225	-0.149	_VQGEAVSNIQENTQTPT(ph)VQEESEEEEVDETGVEVK_
NACA	Phosphorylation	S2029	-0.146	-0.296	_VQGEAVSNIQENTQTPTVQEES(ph)EEEEVDETGVEVK_
PSMC1	Ubiquitylation	K23	-1.788		_K(gl)KYEPPVPTR_
PSMC1	Ubiquitylation	K24	-0.104	1.174	_K(gl)YEPPVPTR_
PSMC1	Ubiquitylation	K48	-1.854	-1.146	_GPDAASK(gl)LPLVTPHTQCR_
PSMC1	Ubiquitylation	K91	1.245		_NQEQMKPLEEK(gl)QEEER_
PSMC1	Ubiquitylation	K98	0.442	4.780	_SK(gl)VDDLR_
PSMC1	Ubiquitylation	K258		0.143	_VVGSELIQK(gl)YLGDGPK_
PSMC1	Ubiquitylation	K265		-1.189	_YLGDGPK(gl)LVR_
PSMC1	Ubiquitylation	K326	0.108	0.246	_GDVK(gl)VIMATNR_
PSMC1	Ubiquitylation	K359	-0.457	-0.853	_KIEFPLPDEK(gl)TK_
PSMC1	Ubiquitylation	K361	-1.277	-0.679	_IEFPLPDEKTK(gl)_
PSMC1	Ubiquitylation	K413	0.108	0.270	_MK(gl)VTNEDFKK_
PSMC1	Ubiquitylation	K420	-0.156	0.859	_MKVTNEDFK(gl)K_
PSMC1	Ubiquitylation	K421	0.068	0.648	_VTNEDFKK(gl)_
PSMC1	Ubiquitylation	K429	-0.735		_SKENVLYK(gl)K_
PSMC1	Ubiquitylation	K430	-0.618		_SKENVLYKK(gl)_
PSMC1	Phosphorylation	T434	-0.194	0.263	_KQEGT(ph)PEGLYL_
PSMC5	Ubiquitylation	K7	0.167		_(ac)MELEEGK(gl)AGSGLR_
PSMC5	Ubiquitylation	K15	-0.747	0.003	_(ac)ALDGPEQMELEEGK(gl)AGSGLR_
PSMC5	Ubiquitylation	K55	-0.538	-0.039	_NELNAK(gl)VR_
PSMC5	Ubiquitylation	K88	-0.430	-0.397	_VLVK(gl)VHPEGK_
PSMC5	Ubiquitylation	K101	-1.062		_FVVDVDK(gl)NIDINDVTPNCR_
PSMC5	Ubiquitylation	K130	-0.243		_ILPNK(gl)VDPLVSLMMVEK_
PSMC5	Ubiquitylation	K330		2.949	_LDILK(gl)IHSR_
PSMC5	Ubiquitylation	K346	0.008		_K(gl)IAELMPGASGAEVK_
PSMC5	Ubiquitylation	K397	0.415	0.779	_DSEK(gl)NMSIK_
PSMC5	Ubiquitylation	K402	0.363		_DSEK(gl)NMSIKK_
TAF1	Phosphorylation	S547		-1.176	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPS(ph)K_
TAF1	Phosphorylation	S550		-1.343	_LLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKES(ph)K_
TAF1	Phosphorylation	S1176	0.662	1.114	_DDDTASVTS(ph)LNSSATGR_
TAF1	Phosphorylation	T1703	0.001	-0.298	_DASVFQDESNM(ox)SVLDIPSAT(ph)PEK_
TAF1B	Ubiquitylation	K56	-2.072	0.281	_YQEVTNTDLIPNTQIK(gl)ALNR_
TAF1B	Ubiquitylation	K122	-3.070		_QAYCK(gl)NPVYTTGR_
YEATS2	Phosphorylation	S118	0.334	0.543	_KFLES(ph)PSR_
YEATS2	Phosphorylation	S120		0.182	_KFLESPS(ph)R_
YEATS2	Phosphorylation	S366		-0.136	_AS(ph)SPIKQSHEPVPDTSVEK_
YEATS2	Phosphorylation	S367	-0.293	-0.048	_ASS(ph)PIKQSHEPVPDTSVEK_
YEATS2	Phosphorylation	T407		-1.280	_HTPFYALPSSLERT(ph)PTK_
YEATS2	Phosphorylation	S447	-1.015	-1.547	_IVPQSQVPNPES(ph)PGK_
YEATS2	Phosphorylation	S463	-1.995	-1.828	_IVS(ph)GSPISTPSPS(ph)PLPR_
YEATS2	Phosphorylation	S465	-1.476	-1.828	_IVSGS(ph)PISTPSPS(ph)PLPR_
YEATS2	Phosphorylation	S473	-1.617	-1.828	_IVSGS(ph)PISTPSPS(ph)PLPR_
YEATS2	Phosphorylation	S536	-0.308	-1.315	_ISTASQVSQGTGS(ph)PVPK_
YEATS2	Phosphorylation	S627	-0.220	-0.802	_GGHM(ox)IAVS(ph)PQK_