bioLOGIC-db

bioLOGIC Data

Query: TAF1B

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
TAF1B	0	-1.051	-0.880	0.740

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
TAF1B	Ubiquitylation	K56	-2.072	0.281	_YQEVTNTDLIPNTQIK(gl)ALNR_
TAF1B	Ubiquitylation	K122	-3.070		_QAYCK(gl)NPVYTTGR_

ProteomicsDB-TAF1B »

Protein-protein Interactions for TAF1B

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait FERMT3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait KIF19	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MPP1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait NAF1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait OAZ1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait POLR1A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TBP;TBPL2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait EAF1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MECP2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MKI67IP	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RRP8	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TAF1B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TRIM44	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZNF2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in TAF1B

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring TAF1B

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	5727	TBP-TAF complex	Database	0.13

Categories featuring TAF1B

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	GO Category	GO:0005654	nucleoplasm	Database	INF
Category members	GO Category	GO:0010467	gene expression	Database	INF
Category members	Pathway	Pathway_348	REACTOME_TRANSCRIPTION	0	9
Category members	Pathway	Pathway_351	REACTOME_RNA_POL_I_TRANSCRIPTION	0	8.31
Category members	Pathway	Pathway_350	REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION	0	7.97
Category members	Pathway	Pathway_346	REACTOME_RNA_POL_I_TRANSCRIPTION_INITIATION	0	3.42
Category members	GO Category	GO:0006360	transcription from RNA polymerase I promoter	Database	2.66
Category members	GO Category	GO:0006361	transcription initiation from RNA polymerase I promoter	Database	2.41
Category members	Pathway	Pathway_345	REACTOME_RNA_POL_I_TRANSCRIPTION_TERMINATION	0	1.9
Category members	GO Category	GO:0006363	termination of RNA polymerase I transcription	Database	1.71
Category members	GO Category	GO:0006362	transcription elongation from RNA polymerase I promoter	Database	1.47
Category members	GO Category	GO:0006351	transcription, DNA-templated	Database	1.07
Category members	GO Category	GO:0003700	sequence-specific DNA binding transcription factor activity	Database	0.63
Category members	GO Category	GO:0017025	TBP-class protein binding	Database	0.35
Category members	GO Category	GO:0046872	metal ion binding	Database	0