RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PHF12	1	-0.980	1.740
HDAC1	1	-1.980	4.450
HDAC1	1	-1.980	4.450	-0.122	0.307	0.969	0.094	0.191
RBBP4	1	2.110	-1.240	0.533	-0.610	0.648
HDAC2	1	-2.390	4.970
HDAC2	1	-2.390	4.970	0.187	-0.007	0.825
CSNK2A1	0	0.050	-0.020	0.030	-0.550	1.362	0.022	-0.045
SUDS3	0	-0.520	0.050	0.420	0.543	0.568
SUDS3	0	0.500	-0.230	0.420	0.543	0.568
FAM60A	0	0.090	-0.240		-0.860	0.174		-0.590
NCOR1	0	-0.820	1.130	-0.827			-0.215	0.037
SIN3A	0	-0.610	0.780	0.378	-0.208	0.304	-0.168	0.410
MORF4L1	0	0.290	0.210				-0.402	-0.377
MORF4L1	0	0.290	0.210	0.051	-0.078	0.206

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CSNK2A1	Ubiquitylation	K71	0.008		_ILK(gl)PVKK_
CSNK2A1	Ubiquitylation	K329	-0.661	-0.889	_EAMEHPYFYTVVK(gl)DQAR_
FAM60A	Ubiquitylation	K128		-0.446	_AGPSLK(gl)TTLKPK_
FAM60A	Ubiquitylation	K151		-0.173	_SNQISK(gl)LQK_
FAM60A	Ubiquitylation	K220		0.733	_ICCGIIYK(gl)GR_
HDAC1	Ubiquitylation	K50	0.036		_K(gl)MEIYRPHK_
HDAC1	Ubiquitylation	K66		-0.593	_ANAEEMTK(gl)YHSDDYIK_
HDAC1	Ubiquitylation	K74	0.620	-1.473	_YHSDDYIK(gl)FLR_
HDAC1	Ubiquitylation	K89	0.749	-0.241	_SIRPDNMSEYSK(gl)QMQR_
HDAC1	Phosphorylation	S393	-1.133	-1.144	_M(ox)LPHAPGVQM(ox)QAIPEDAIPEES(ph)GDEDEDDPDKR_
HDAC1	Phosphorylation	S409	1.326	1.144	_ISICS(ph)SDKR_
HDAC1	Phosphorylation	S410	1.326	1.144	_ISICS(ph)SDKR_
HDAC1	Ubiquitylation	K412	0.642	-0.744	_ISICSSDK(gl)R_
HDAC2	Ubiquitylation	K50	0.036		_K(gl)MEIYRPHK_
HDAC2	Ubiquitylation	K67		-0.467	_ATAEEMTK(gl)YHSDEYIK_
HDAC2	Ubiquitylation	K89	0.749	-0.241	_SIRPDNMSEYSK(gl)QMQR_
HDAC2	Ubiquitylation	K284	0.749		_GHAK(gl)CVEVVK_
HDAC2	Phosphorylation	S394	-0.865	-0.997	_M(ox)LPHAPGVQM(ox)QAIPEDAVHEDS(ph)GDEDGEDPDKR_
HDAC2	Phosphorylation	S422	0.482	0.781	_IACDEEFS(ph)DSEDEGEGGR_
MORF4L1	Ubiquitylation	K38	-0.038		_VAIKDK(gl)QVK_
MORF4L1	Ubiquitylation	K41	-0.246		_VAIKDKQVK(gl)_
MORF4L1	Ubiquitylation	K103	-0.693		_VLK(gl)YVDTNLQK_
MORF4L1	Ubiquitylation	K111	-0.321		_YVDTNLQK(gl)QR_
MORF4L1	Ubiquitylation	K117	-0.190		_ELQK(gl)ANQEQYAEGK_
MORF4L1	Ubiquitylation	K127	-0.098	0.304	_ANQEQYAEGK(gl)MR_
MORF4L1	Ubiquitylation	K143	-0.206		_TSGLQQK(gl)NVEVK_
MORF4L1	Ubiquitylation	K226	-0.743	-0.526	_QLFYLPAK(gl)K_
MORF4L1	Ubiquitylation	K227	-0.779	-0.526	_QLFYLPAKK(gl)_
MORF4L1	Ubiquitylation	K240		0.245	_NVDSILEDYANYK(gl)K_
MORF4L1	Ubiquitylation	K241		0.245	_NVDSILEDYANYK(gl)K_
MORF4L1	Ubiquitylation	K249	-1.051		_GNTDNK(gl)EYAVNEVVAGIK_
NCOR1	Phosphorylation	S1195	-0.029	0.716	_MPIEDS(ph)SPEKGREEAASK_
NCOR1	Phosphorylation	S1196	0.087	0.141	_MPIEDSS(ph)PEKGR_
NCOR1	Phosphorylation	S1472	0.700	0.536	_AQLS(ph)PGIYDDTSAR_
NCOR1	Phosphorylation	S1977	-0.959	-0.974	_YETPSDAIEVIS(ph)PASSPAPPQEK_
NCOR1	Ubiquitylation	K1998		-2.086	_LQTYQPEVVK(gl)ANQAENDPTR_
NCOR1	Phosphorylation	S2120	0.148	0.154	_VS(ph)PENLVDK_
NCOR1	Phosphorylation	S2151	-1.006	-0.922	_SHVSSEPYEPIS(ph)PPQVPVVHEK_
NCOR1	Phosphorylation	S2184	0.120	0.226	_S(ph)PGSISYLPSFFTK_
NCOR1	Phosphorylation	S2187		0.396	_SPGS(ph)ISYLPSFFTK_
PHF12	Phosphorylation	T129		5.544	_RT(ph)T(ph)SPS(ph)SDTDLLDRS(ph)ASK_
PHF12	Phosphorylation	T130		5.544	_RT(ph)T(ph)SPS(ph)SDTDLLDRS(ph)ASK_
PHF12	Phosphorylation	S131	0.403	0.428	_TTS(ph)PSSDTDLLDR_
PHF12	Phosphorylation	S133		5.544	_RT(ph)T(ph)SPS(ph)SDTDLLDRS(ph)ASK_
PHF12	Phosphorylation	S142		5.544	_RT(ph)T(ph)SPS(ph)SDTDLLDRS(ph)ASK_
PHF12	Phosphorylation	T671	-0.003	-0.158	_VLT(ph)PPQAAGDGILATTANQR_
PHF12	Phosphorylation	S977	0.955	0.941	_GDAS(ph)LLQDGVLAEK_
RBBP4	Ubiquitylation	K4	0.699	0.574	_(ac)ADK(gl)EAAFDDAVEER_
RBBP4	Ubiquitylation	K160	-1.765		_HPSK(gl)PDPSGECNPDLR_
SIN3A	Ubiquitylation	K155	0.182		_EFK(gl)SQSIDTPGVISR_
SIN3A	Phosphorylation	T266		-0.572	_VSKPSQLQAHTPASQQT(ph)PPLPPYASPR_
SIN3A	Phosphorylation	S277		-1.598	_S(ph)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK_
SIN3A	Phosphorylation	S295		-1.959	_SPPVQPHTPVTISLGTAPS(ph)LQNNQPVEFNHAINYVNK_
SIN3A	Ubiquitylation	K638		-0.223	_VLEAIQK(gl)K_
SIN3A	Ubiquitylation	K639		-0.223	_VLEAIQK(gl)K_
SIN3A	Ubiquitylation	K715	1.012		_GFNK(gl)VWR_
SIN3A	Phosphorylation	S832	0.764	0.363	_GDLS(ph)DVEEEEEEEM(ox)DVDEATGAVKK_
SIN3A	Ubiquitylation	K875	0.131	0.003	_LLFSNTAAQK(gl)LR_
SIN3A	Ubiquitylation	K937	-0.224	-0.025	_DK(gl)SDSPAIQLR_
SIN3A	Phosphorylation	S940		-0.107	_DKSDS(ph)PAIQLR_
SIN3A	Phosphorylation	T1111	0.691	0.517	_YM(ox)NSDTT(ph)SPELR_
SIN3A	Phosphorylation	S1112	0.623	0.725	_YM(ox)NSDTTS(ph)PELR_
SUDS3	Phosphorylation	S234	-2.333	-2.016	_RPAS(ph)PS(ph)SPEHLPATPAESPAQR_
SUDS3	Phosphorylation	S236	-1.584	-1.386	_RPASPS(ph)SPEHLPATPAESPAQR_