bioLOGIC-db

bioLOGIC Data

Query: SUDS3

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
SUDS3	0	-1.439	-0.520	0.050	0.420	0.543	0.568
SUDS3	0	-1.439	0.500	-0.230	0.420	0.543	0.568

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
SUDS3	Phosphorylation	S236	-1.584	-1.386	_RPASPS(ph)SPEHLPATPAESPAQR_
SUDS3	Phosphorylation	S234	-2.333	-2.016	_RPAS(ph)PS(ph)SPEHLPATPAESPAQR_

ProteomicsDB-SUDS3 »

Protein-protein Interactions for SUDS3

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait FAM60A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait HDAC1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SAP30	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SIN3A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait C13orf31	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FAM60A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait HDAC1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ING2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MXD1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MXD3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PHF23	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RBBP7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SUDS3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZNF704	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in SUDS3

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	Sds3	IPR013907	0

Protein complexes (CORUM database) featuring SUDS3

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Corum	2721	HCF-1 complex	Database	2.08
Category members	Corum	691	SIN3-SAP25 complex	Database	1.77
Category members	Corum	743	SIN3-SAP25 complex	Database	1.77
Category members	Corum	592	SAP complex (Sin3-associated protein complex)	Database	1.33
Category members	Corum	2851	ING2 complex	Database	0.74

Categories featuring SUDS3

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	GO Category	GO:0006915	apoptotic process	Database	2.12
Category members	GO Category	GO:0019899	enzyme binding	Database	1.57
Category members	GO Category	GO:0045892	negative regulation of transcription, DNA-dependent	Database	1.15
Category members	GO Category	GO:0006351	transcription, DNA-templated	Database	1.07
Category members	GO Category	GO:0016580	Sin3 complex	Database	0.35
Category members	GO Category	GO:0042802	identical protein binding	Database	0.26
Category members	GO Category	GO:0043065	positive regulation of apoptotic process	Database	0.26
Category members	GO Category	GO:0042826	histone deacetylase binding	Database	0.16
Category members	GO Category	GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Database	0.02
Category members	GO Category	GO:0004407	histone deacetylase activity	Database	0
Category members	GO Category	GO:0016575	histone deacetylation	Database	0
Category members	GO Category	GO:0042803	protein homodimerization activity	Database	0