RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MTDH	2	0.690	-0.240				0.222	0.258
BAD	0	-0.660	1.190
PIK3CB	0	-1.390	2.350
PIK3CB	0	-0.710	1.450
TFEB	0	0.270	0.450
TMEM59	0	1.350	-0.820
SH3BP4	0	-0.080	0.600
PRKAA1	0	0.910	0.060
PRKAA2	0	-0.030	-0.350
PRKAA2	0	-0.030	-0.350
PLEKHF1	0	0.780	-0.300
BNIP3	0	0.610	-0.650
ULK1	0	0.740	-0.520
LRRK2	0	0.530	-0.620	-0.240

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BAD	Phosphorylation	S74	-0.904	-0.452	_HS(ph)SYPAGTEDDEGM(ox)GEEPSPFR_
BAD	Phosphorylation	S75	-0.914	-0.660	_HSS(ph)YPAGTEDDEGMGEEPSPFR_
BAD	Phosphorylation	S97		0.056	_S(ph)RSAPPNLWAAQR_
BAD	Phosphorylation	S99	-0.299	0.161	_S(ph)APPNLWAAQR_
BAD	Phosphorylation	S118	1.277	1.089	_RM(ox)S(ph)DEFVDSFKK_
BNIP3	Phosphorylation	S136	0.383	0.514	_ASETDTHS(ph)IGEK_
BNIP3	Ubiquitylation	K161	0.164	-0.368	_EVESILK(gl)K_
MTDH	Phosphorylation	T143		-0.168	_TVEVAEGEAVRT(ph)PQSVTAK_
MTDH	Phosphorylation	S298	3.215	2.229	_LSSQIS(ph)AGEEK_
MTDH	Phosphorylation	S308	-1.181	-0.077	_WNSVS(ph)PASAGK_
MTDH	Phosphorylation	S426	0.024	0.054	_SQEPIPDDQKVS(ph)DDDKEK_
MTDH	Ubiquitylation	K504	-0.009		_TISTSDPAEVLVK(gl)NSQPIK_
MTDH	Phosphorylation	S568	-1.097	-0.503	_SETSWES(ph)PK_
PIK3CB	Ubiquitylation	K1044		0.990	_SEEEALKQFKQK(gl)_
PLEKHF1	Phosphorylation	S312	-0.501	-0.472	_QEEAEEQGAGS(ph)PGQPAHLAR_
PRKAA1	Ubiquitylation	K271		-0.536	_ATIK(gl)DIR_
PRKAA1	Ubiquitylation	K396		-0.419	_HTLDELNPQK(gl)SK_
PRKAA1	Ubiquitylation	K485	-1.326	-1.554	_SIDDEITEAK(gl)SGTATPQR_
PRKAA2	Ubiquitylation	K271		-0.536	_ATIK(gl)DIR_
PRKAA2	Phosphorylation	S377	-0.020		_MPPLIADS(ph)PK_
SH3BP4	Phosphorylation	S131		-0.309	_NSTLSDSGMIDNLPDS(ph)PDEVAK_
SH3BP4	Phosphorylation	S246	0.304	0.661	_SYS(ph)LSELSVLQAK_
TFEB	Phosphorylation	S541		-0.724	_KDLDLMLLDDSLLPLASDPLLSTMS(ph)PEASK_
TFEB	Phosphorylation	S555	0.499	0.811	_RSSFS(ph)MEEGDVL_
TMEM59	Ubiquitylation	K206		-0.063	_ESSLSK(gl)MSYLQMR_
TMEM59	Ubiquitylation	K302	-2.229	-0.900	_SK(gl)TEDHEEAGPLPTK(gl)VNLAHSEI_
TMEM59	Ubiquitylation	K315	-1.591	-0.691	_TEDHEEAGPLPTK(gl)VNLAHSEI_
ULK1	Phosphorylation	S450	-0.237	-0.173	_NLQS(ph)PTQFQTPR_
ULK1	Phosphorylation	T468	-0.247	0.456	_SGST(ph)SPLGFAR_
ULK1	Phosphorylation	S469	0.035	0.470	_SGSTS(ph)PLGFAR_
ULK1	Phosphorylation	S623	-0.793	-0.874	_NPLPPILGS(ph)PTK_
ULK1	Phosphorylation	T625	-0.547	-0.776	_NPLPPILGSPT(ph)K_
ULK1	Phosphorylation	T636		0.087	_T(ph)PSSQNLLALLAR_
ULK1	Phosphorylation	S638	-0.154	0.598	_TPS(ph)SQNLLALLAR_