RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ALYREF	3	-0.280	0.640	0.073	0.076	0.370
CHTOP	2	-0.080	-0.160	0.030	-0.136		-0.592	0.338
THOC1	1	-1.190	2.310	-0.032	1.528	0.991	0.437	0.505
POLDIP3	1	-1.920	3.580				-0.895	-0.474
POLDIP3	1	-1.920	3.580	-1.399
THOC2	1	1.160	-0.300	0.704	0.621	0.548	0.422	0.374
SARNP	1	-0.720	1.120
SARNP	1	-0.720	1.120			-1.018
SARNP	1	-0.720	1.120	0.972			0.087	-0.130
THOC3	0	-0.230	0.190	0.097	0.702	1.021	-0.125	-0.075
ZC3H11A	0	0.010	-0.540	-0.643	-0.456	-0.039	-0.438	-0.085
ZC3H11A	0	1.590	-1.080	-0.643	-0.456	-0.039	-0.438	-0.085
THOC5	0	-0.860	0.700	0.098	0.341		0.166	0.197
THOC6	0	0.100	-0.300	-0.547	0.540	0.379	-0.405	-0.286
NXF1	0			-0.262			0.366	0.002
THOC7	0	-0.920	1.860	1.003			0.548	-0.086

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ALYREF	Ubiquitylation	K168	1.438	1.581	_KADALK(gl)AMK_
ALYREF	Ubiquitylation	K242	1.295	1.872	_NSK(gl)QQLSAEELDAQLDAYNAR_
ALYREF	Phosphorylation	S246	2.160	1.598	_QQLS(ph)AEELDAQLDAYNAR_
CHTOP	Ubiquitylation	K16	2.153		_STTK(gl)MSLNER_
CHTOP	Ubiquitylation	K28	1.618		_FTNMLK(gl)NK_
CHTOP	Ubiquitylation	K30	1.618		_FTNMLK(gl)NK_
CHTOP	Phosphorylation	T33	-0.582	-0.320	_NKQPT(ph)PVNIR_
CHTOP	Ubiquitylation	K70	0.849		_LAQQMENRPSVQAALK(gl)LK_
CHTOP	Ubiquitylation	K81		0.939	_LGK(gl)SNIQAR_
CHTOP	Ubiquitylation	K213	1.034		_PVLTK(gl)EQLDNQLDAYMSK_
CHTOP	Ubiquitylation	K226		2.163	_EQLDNQLDAYMSK(gl)TK_
CHTOP	Ubiquitylation	K228	1.831		_EQLDNQLDAYMSKTK(gl)_
NXF1	Ubiquitylation	K173	0.298		_AQFFVEDASTASALK(gl)AVNYK_
NXF1	Ubiquitylation	K607	0.028		_SAQAFTHLK(gl)AK_
POLDIP3	Phosphorylation	S126	-1.227	-1.583	_S(ph)SPAAFINPPIGTVTPALK_
POLDIP3	Phosphorylation	S127	-0.863	-1.161	_RSS(ph)PAAFINPPIGTVTPALK_
POLDIP3	Ubiquitylation	K248	0.454		_TK(gl)ALTNMSR_
SARNP	Ubiquitylation	K12	0.494		_(ac)ATETVELHKLK(gl)_
SARNP	Ubiquitylation	K28	1.542		_GLETK(gl)GIK_
SARNP	Ubiquitylation	K88	0.162		_TVDVAAEK(gl)K_
SARNP	Ubiquitylation	K89	0.162		_TVDVAAEK(gl)K_
SARNP	Ubiquitylation	K120	9.280		_FNVPVSLESKK(gl)_
THOC1	Phosphorylation	S2	-0.507	-0.869	_(ac)M(ox)S(ph)PTPPLFSLPEAR_
THOC1	Phosphorylation	S560	0.396	0.339	_TGEDEDEEDNDALLKENES(ph)PDVRR_
THOC2	Ubiquitylation	K35		-0.485	_ILSENK(gl)SHDSSTYR_
THOC2	Ubiquitylation	K307	-1.093	0.032	_EIAEAK(gl)QIVR_
THOC2	Ubiquitylation	K415		-1.122	_GSPVNALQNK(gl)R_
THOC2	Ubiquitylation	K1084	2.196	0.002	_ATGFDGGNK(gl)ADQLDYENFR_
THOC2	Phosphorylation	S1364		-0.355	_EKEPS(ph)RER_
THOC2	Phosphorylation	S1393	0.261	-0.721	_TPVSGSLKS(ph)PVPR_
THOC2	Phosphorylation	S1417	0.121	0.330	_IDTHPS(ph)PSHSSTVK_
THOC2	Phosphorylation	S1516		-0.075	_HKSES(ph)PCESPYPNEK_
THOC3	Ubiquitylation	K86	0.200	0.498	_TASVFLLEK(gl)DR_
THOC3	Ubiquitylation	K133	-0.510	-0.282	_TTK(gl)CIATVNTK_
THOC5	Ubiquitylation	K222	0.387		_ILKEIEVK(gl)K_
THOC5	Ubiquitylation	K223	0.997		_ILKEIEVKK(gl)_
ZC3H11A	Phosphorylation	S108	0.696	0.654	_TVLPTVPES(ph)PEEEVK_
ZC3H11A	Phosphorylation	S132	-0.529	-0.437	_LSVQSNPS(ph)PQLR_
ZC3H11A	Phosphorylation	S171	-1.198	-0.263	_VESSENVPSPTHPPVVINAADDDEDDDDQFS(ph)EEGDETK_
ZC3H11A	Ubiquitylation	K269	-0.369		_TVTLSTK(gl)QGEEPLVR_
ZC3H11A	Phosphorylation	S295		-0.080	_KFSAGGDS(ph)DPPLK_
ZC3H11A	Phosphorylation	T321	-1.355	-1.057	_KVEAPETNIDKT(ph)PK_
ZC3H11A	Phosphorylation	S495	-0.391	-0.759	_VQQSSESSTSS(ph)PSQHEATPGAR_
ZC3H11A	Phosphorylation	S738		-1.473	_DSLVLPPTQSSSDSS(ph)PPEVSGPSSSQMSMK_
ZC3H11A	Phosphorylation	S758	0.694	0.057	_RLS(ph)SASTGKPPLSVEDDFEK_