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Query: SARNP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SARNP 1 10.311 -0.720 1.120
SARNP 1 10.311 -0.720 1.120 -1.018
SARNP 1 10.311 -0.720 1.120 0.972 0.087 -0.130

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SARNP Ubiquitylation K12 0.494 _(ac)ATETVELHKLK(gl)_
SARNP Ubiquitylation K28 1.542 _GLETK(gl)GIK_
SARNP Ubiquitylation K88 0.162 _TVDVAAEK(gl)K_
SARNP Ubiquitylation K89 0.162 _TVDVAAEK(gl)K_
SARNP Ubiquitylation K120 9.280 _FNVPVSLESKK(gl)_

Background Information for SARNP:





Protein-protein Interactions for SARNP

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait THOC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait DNAJC14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SARNP Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SARNP

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SAP_dom IPR003034 1.96
Category members LETM1 IPR011685 0.29


Protein complexes (CORUM database) featuring SARNP

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SARNP

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0016607 nuclear speck Database 4.84
Category members GO Category GO:0006406 mRNA export from nucleus Database 4.09
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0000346 transcription export complex Database 1.18
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0006417 regulation of translation Database 0


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