RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
KIF4A	2	0.450	-0.410				-0.346	-0.337
KIF4A	2	0.450	-0.410		0.413
HDAC1	1	-1.980	4.450
HDAC1	1	-1.980	4.450	-0.122	0.307	0.969	0.094	0.191
DNMT3B	0	0.990	-0.100				0.783	0.015
SMC4	0	0.480	-0.480	0.146	-0.138	0.461	0.023	-0.067
SMC2	0	-0.770	1.000		-0.048	0.476	-0.227	-0.071
SMC2	0	-0.770	1.000
SMC2	0	-0.770	1.000	0.106
SMARCA5	0	0.420	-0.750	0.381	0.398	0.759	0.628	0.494
SIN3A	0	-0.610	0.780	0.378	-0.208	0.304	-0.168	0.410

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
DNMT3B	Ubiquitylation	K597	0.236		_ELGIK(gl)VGK_
DNMT3B	Ubiquitylation	K623	0.433		_HEGNIK(gl)YVNDVR_
HDAC1	Ubiquitylation	K50	0.036		_K(gl)MEIYRPHK_
HDAC1	Ubiquitylation	K66		-0.593	_ANAEEMTK(gl)YHSDDYIK_
HDAC1	Ubiquitylation	K74	0.620	-1.473	_YHSDDYIK(gl)FLR_
HDAC1	Ubiquitylation	K89	0.749	-0.241	_SIRPDNMSEYSK(gl)QMQR_
HDAC1	Phosphorylation	S393	-1.133	-1.144	_M(ox)LPHAPGVQM(ox)QAIPEDAIPEES(ph)GDEDEDDPDKR_
HDAC1	Phosphorylation	S409	1.326	1.144	_ISICS(ph)SDKR_
HDAC1	Phosphorylation	S410	1.326	1.144	_ISICS(ph)SDKR_
HDAC1	Ubiquitylation	K412	0.642	-0.744	_ISICSSDK(gl)R_
KIF4A	Ubiquitylation	K613	1.103		_LQELEGQIADLK(gl)K_
KIF4A	Ubiquitylation	K614	1.103		_LQELEGQIADLK(gl)K_
KIF4A	Ubiquitylation	K715	0.852	1.337	_LK(gl)DALQK_
KIF4A	Phosphorylation	T802	1.153		_RT(ph)FSLTEVR_
KIF4A	Phosphorylation	S804	1.144	0.733	_TFS(ph)LTEVR_
KIF4A	Phosphorylation	S818	-0.103		_GQVSESEDS(ph)ITK_
KIF4A	Phosphorylation	T820	0.302	0.224	_GQVSESEDSIT(ph)K_
KIF4A	Ubiquitylation	K883	-0.435		_IQVSK(gl)LESSLK_
KIF4A	Ubiquitylation	K993	0.075		_QK(gl)LTLLQVASR_
KIF4A	Phosphorylation	T1184		-1.056	_T(ph)PPAPSPFDLPELK_
KIF4A	Phosphorylation	S1228	1.720	2.072	_RALASNTSFFSGCS(ph)PIEEEAH_
SIN3A	Ubiquitylation	K155	0.182		_EFK(gl)SQSIDTPGVISR_
SIN3A	Phosphorylation	T266		-0.572	_VSKPSQLQAHTPASQQT(ph)PPLPPYASPR_
SIN3A	Phosphorylation	S277		-1.598	_S(ph)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK_
SIN3A	Phosphorylation	S295		-1.959	_SPPVQPHTPVTISLGTAPS(ph)LQNNQPVEFNHAINYVNK_
SIN3A	Ubiquitylation	K638		-0.223	_VLEAIQK(gl)K_
SIN3A	Ubiquitylation	K639		-0.223	_VLEAIQK(gl)K_
SIN3A	Ubiquitylation	K715	1.012		_GFNK(gl)VWR_
SIN3A	Phosphorylation	S832	0.764	0.363	_GDLS(ph)DVEEEEEEEM(ox)DVDEATGAVKK_
SIN3A	Ubiquitylation	K875	0.131	0.003	_LLFSNTAAQK(gl)LR_
SIN3A	Ubiquitylation	K937	-0.224	-0.025	_DK(gl)SDSPAIQLR_
SIN3A	Phosphorylation	S940		-0.107	_DKSDS(ph)PAIQLR_
SIN3A	Phosphorylation	T1111	0.691	0.517	_YM(ox)NSDTT(ph)SPELR_
SIN3A	Phosphorylation	S1112	0.623	0.725	_YM(ox)NSDTTS(ph)PELR_
SMARCA5	Phosphorylation	S66	-0.501	-0.553	_GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(ph)PGKQK_
SMARCA5	Phosphorylation	S116	0.045	-0.051	_TPTS(ph)PLK_
SMARCA5	Ubiquitylation	K160	0.340		_TEQEEDEELLTESSK(gl)ATNVCTR_
SMARCA5	Ubiquitylation	K319		-0.811	_SK(gl)LSEIVR_
SMARCA5	Ubiquitylation	K691	0.305		_KTAEMNEK(gl)LSK_
SMARCA5	Ubiquitylation	K694	1.235		_LSK(gl)MGESSLR_
SMARCA5	Ubiquitylation	K799	0.558	0.382	_TIGYK(gl)VPR_
SMARCA5	Ubiquitylation	K847		0.509	_LLTQGFTNWNK(gl)R_
SMARCA5	Ubiquitylation	K855		0.872	_DFNQFIK(gl)ANEK_
SMARCA5	Ubiquitylation	K929	0.067	-1.279	_YK(gl)APFHQLR_
SMC2	Ubiquitylation	K1026	0.131	-0.616	_ILTTIEDLDQKK(gl)_
SMC4	Phosphorylation	S22	-2.829	-1.797	_RREEGPPPPS(ph)PDGASSDAEPEPPSGR_
SMC4	Phosphorylation	S27	-2.450	-3.129	_EEGPPPPSPDGAS(ph)SDAEPEPPSGR_
SMC4	Phosphorylation	S28	-2.042	-2.174	_RREEGPPPPSPDGASS(ph)DAEPEPPSGR_
SMC4	Phosphorylation	T39		0.060	_T(ph)ESPATAAETASEELDNR_
SMC4	Phosphorylation	S41	0.075	0.293	_TES(ph)PATAAETASEELDNR_
SMC4	Phosphorylation	T44	0.131	-0.179	_TESPAT(ph)AAETASEELDNR_
SMC4	Phosphorylation	T48	0.032	0.292	_TES(ph)PATAAET(ph)ASEELDNR_
SMC4	Phosphorylation	S50	-0.579	-0.123	_TES(ph)PATAAETAS(ph)EELDNR_
SMC4	Ubiquitylation	K106	-0.826	-0.664	_ILGPFHK(gl)R_
SMC4	Ubiquitylation	K202	-0.181	-0.066	_DNTSVYHISGK(gl)K_
SMC4	Ubiquitylation	K207		-0.089	_TFK(gl)DVGNLLR_
SMC4	Ubiquitylation	K268	-0.240	-0.861	_LNEPIK(gl)VLCR_
SMC4	Ubiquitylation	K416	0.450	-0.040	_LEK(gl)QLQK_
SMC4	Ubiquitylation	K607		0.339	_VLDAIIQEK(gl)K_
SMC4	Ubiquitylation	K608		0.339	_VLDAIIQEK(gl)K_
SMC4	Ubiquitylation	K968		-0.407	_SLEDK(gl)AAEVVK_
SMC4	Ubiquitylation	K974		-0.407	_SLEDK(gl)AAEVVK_
SMC4	Ubiquitylation	K1112	-0.254	-0.466	_VAELDK(gl)ITYER_
SMC4	Ubiquitylation	K1187	0.176		_K(gl)IFNLSGGEK_
SMC4	Ubiquitylation	K1273		-0.330	_TYNITK(gl)SVAVNPK_
SMC4	Ubiquitylation	K1285		-1.105	_EIASK(gl)GLC_