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Query: VIMP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VIMP 0 -4.758 0.490 -0.510 -2.036

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
VIMP Ubiquitylation K190 -1.565 -1.157 _KPQEEDSPGPSTSSVLK(gl)R_
VIMP Ubiquitylation K117 -2.952 -1.705 _AAAAVEPDVVVK(gl)R_

Background Information for VIMP:


Pubmed-VIMP »
Uniprot-VIMP »
Biogrid-VIMP »
ProteomicsDB-VIMP »

Tumorportal-VIMP »
COSMIC-VIMP »
GenomeRNAi-VIMP »
Genecards-VIMP


Protein-protein Interactions for VIMP
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in VIMP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Selenoprotein_S IPR009703 0.04


Protein complexes (CORUM database) featuring VIMP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 4999 p97/VCP-VIMP-DERL1-DERL2-HRD1-SEL1L complex Database 0.52
Category members Corum 4998 p97/VCP-VIMP-DERL2 complex Database 0.01
Category members Corum 4997 p97/VCP-VIMP-DERL1 complex Database 0
Category members Corum 5684 Membrane protein complex (DERL1, SELS, VCP) Database 0


Categories featuring VIMP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0019899 enzyme binding Database 1.57
Category members GO Category GO:0030968 endoplasmic reticulum unfolded protein response Database 1.35
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0032869 cellular response to insulin stimulus Database 0.63
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0030433 ER-associated ubiquitin-dependent protein catabolic process Database 0.33
Category members GO Category GO:0009749 response to glucose Database 0.13
Category members GO Category GO:0045184 establishment of protein localization Database 0.1
Category members GO Category GO:0016209 antioxidant activity Database 0.06
Category members GO Category GO:0030970 retrograde protein transport, ER to cytosol Database 0.06
Category members GO Category GO:0045454 cell redox homeostasis Database 0.05
Category members GO Category GO:0005881 cytoplasmic microtubule Database 0.04
Category members GO Category GO:0032715 negative regulation of interleukin-6 production Database 0.03
Category members GO Category GO:0002865 negative regulation of acute inflammatory response to antigenic stimulus Database 0
Category members GO Category GO:0004872 receptor activity Database 0
Category members GO Category GO:0006111 regulation of gluconeogenesis Database 0
Category members GO Category GO:0006983 ER overload response Database 0
Category members GO Category GO:0008430 selenium binding Database 0
Category members GO Category GO:0030176 integral to endoplasmic reticulum membrane Database 0
Category members GO Category GO:0032720 negative regulation of tumor necrosis factor production Database 0
Category members GO Category GO:0034361 very-low-density lipoprotein particle Database 0
Category members GO Category GO:0034362 low-density lipoprotein particle Database 0
Category members GO Category GO:0034599 cellular response to oxidative stress Database 0
Category members GO Category GO:0045719 negative regulation of glycogen biosynthetic process Database 0
Category members GO Category GO:0046325 negative regulation of glucose import Database 0
Category members GO Category GO:0050728 negative regulation of inflammatory response Database 0
Category members GO Category GO:0051771 negative regulation of nitric-oxide synthase biosynthetic process Database 0
Category members GO Category GO:0051775 response to redox state Database 0
Category members GO Category GO:0071222 cellular response to lipopolysaccharide Database 0


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