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Query: USP47

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
USP47 2 5.404 0.370 -0.540
USP47 2 5.404 0.370 -0.540 1.392

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
USP47 Phosphorylation S910 1.689 2.323 _STETSDFENIES(ph)PLNER_
USP47 Phosphorylation T932 0.805 _ELEQHIQT(ph)SDPENFQSEER_
USP47 Phosphorylation S933 0.302 0.148 _ELEQHIQTS(ph)DPENFQSEER_
USP47 Phosphorylation S832 0.001 -0.284 _LFVLLPEQS(ph)PVSYSK_

Background Information for USP47:


Pubmed-USP47 »
Uniprot-USP47 »
Biogrid-USP47 »
ProteomicsDB-USP47 »

Tumorportal-USP47 »
COSMIC-USP47 »
GenomeRNAi-USP47 »
Genecards-USP47


Protein-protein Interactions for USP47
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait HDAC6 Cat. description Hein, Mann, Cell 2015
Category members IP bait ASTE1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait AURKA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait AVIL Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait BTRC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DDI1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FBXW11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GRINL1A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HOGA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait INPP5K Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KIF22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MAPK14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NCF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait OBFC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RHPN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RND2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPATA20 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TBCCD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRMT2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UBXN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait USP47 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in USP47
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members UCH/PAN2 IPR028889 0.62
Category members Peptidase_C19_UCH IPR001394 0.53


Protein complexes (CORUM database) featuring USP47
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring USP47
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006511 ubiquitin-dependent protein catabolic process Database 3.57
Category members GO Category GO:0006974 cellular response to DNA damage stimulus Database 3.57
Category members GO Category GO:0004843 ubiquitin-specific protease activity Database 3.28
Category members GO Category GO:0004221 ubiquitin thiolesterase activity Database 1.36
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0042493 response to drug Database 0.66
Category members GO Category GO:0043066 negative regulation of apoptotic process Database 0.6
Category members GO Category GO:0035520 monoubiquitinated protein deubiquitination Database 0.54
Category members GO Category GO:0034644 cellular response to UV Database 0.49
Category members GO Category GO:0010972 negative regulation of G2/M transition of mitotic cell cycle Database 0.25
Category members GO Category GO:0019005 SCF ubiquitin ligase complex Database 0.09
Category members GO Category GO:0006284 base-excision repair Database 0.04
Category members GO Category GO:0008234 cysteine-type peptidase activity Database 0
Category members GO Category GO:0030307 positive regulation of cell growth Database 0
Category members GO Category GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process Database 0


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