bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: ATG7

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ATG7 0 1.428 -0.140 0.720 0.708

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for ATG7:





Protein-protein Interactions for ATG7

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ARHGAP25 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ATG10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNJ5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KHDRBS2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KIAA0930 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGMN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NAA40 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RWDD2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STXBP6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ATG7

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ThiF_NAD_FAD-bd IPR000594 0.19
Category members Molybdenum_cofac_synth_MoeB IPR009036 0.19


Protein complexes (CORUM database) featuring ATG7

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ATG7

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_621 REACTOME_ADAPTIVE_IMMUNE_SYSTEM 0 4.72
Category members GO Category GO:0015031 protein transport Database 3.48
Category members Pathway Pathway_458 REACTOME_IMMUNE_SYSTEM 0 3
Category members Pathway Pathway_764 REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION 0 2.56
Category members Pathway Pathway_832 REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION 0 1.58
Category members GO Category GO:0061025 membrane fusion Database 0.93
Category members GO Category GO:0043066 negative regulation of apoptotic process Database 0.6
Category members GO Category GO:0001889 liver development Database 0.51
Category members GO Category GO:0021680 cerebellar Purkinje cell layer development Database 0.44
Category members GO Category GO:0030163 protein catabolic process Database 0.38
Category members GO Category GO:0021987 cerebral cortex development Database 0.37
Category members GO Category GO:0031175 neuron projection development Database 0.12
Category members GO Category GO:0004839 ubiquitin activating enzyme activity Database 0.11
Category members GO Category GO:0032446 protein modification by small protein conjugation Database 0.11
Category members GO Category GO:0003824 catalytic activity Database 0.11
Category members GO Category GO:0021860 pyramidal neuron development Database 0.11
Category members GO Category GO:0016239 positive regulation of macroautophagy Database 0.09
Category members Pathway Pathway_526 KEGG_REGULATION_OF_AUTOPHAGY 0 0
Category members GO Category GO:0000407 pre-autophagosomal structure Database 0
Category members GO Category GO:0005930 axoneme Database 0
Category members GO Category GO:0006464 cellular protein modification process Database 0
Category members GO Category GO:0006497 protein lipidation Database 0
Category members GO Category GO:0006520 cellular amino acid metabolic process Database 0
Category members GO Category GO:0006914 autophagy Database 0
Category members GO Category GO:0006996 organelle organization Database 0
Category members GO Category GO:0007628 adult walking behavior Database 0
Category members GO Category GO:0009791 post-embryonic development Database 0
Category members GO Category GO:0021955 central nervous system neuron axonogenesis Database 0
Category members GO Category GO:0031396 regulation of protein ubiquitination Database 0
Category members GO Category GO:0031401 positive regulation of protein modification process Database 0
Category members GO Category GO:0042594 response to starvation Database 0
Category members GO Category GO:0042803 protein homodimerization activity Database 0
Category members GO Category GO:0050877 neurological system process Database 0
Category members GO Category GO:0055013 cardiac muscle cell development Database 0


© Copyright Svejstrup Laboratory 2015