bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: ARL3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ARL3 0 0.216 0.820 -0.590

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ARL3 Ubiquitylation K9 0.216 _K(gl)LKSAPDQEVR_
ARL3 Ubiquitylation K11 -0.579 _LK(gl)SAPDQEVR_

Background Information for ARL3:


Pubmed-ARL3 »
Uniprot-ARL3 »
Biogrid-ARL3 »
ProteomicsDB-ARL3 »

Tumorportal-ARL3 »
COSMIC-ARL3 »
GenomeRNAi-ARL3 »
Genecards-ARL3


Protein-protein Interactions for ARL3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait UNC119 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ARL3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members EF_GTP-bd_dom IPR000795 1.57
Category members Small_GTPase_ARF/SAR IPR006689 0.8
Category members Small_GTPase IPR001806 0.65
Category members Gtr1_RagA IPR006762 0.63
Category members MIRO-like IPR013684 0.4
Category members Small_GTP-bd_dom IPR005225 0.32
Category members ATPase_AAA_core IPR003959 0.14
Category members SRP_receptor_beta_su IPR019009 0.13
Category members Gprotein_alpha_su IPR001019 0.02
Category members Small_GTPase_SAR1 IPR006687 0
Category members Small_GTPase_ARF IPR024156 0


Protein complexes (CORUM database) featuring ARL3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ARL3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0007186 G-protein coupled receptor signaling pathway Database 1.53
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0008017 microtubule binding Database 0.79
Category members GO Category GO:0005813 centrosome Database 0.75
Category members GO Category GO:0006892 post-Golgi vesicle-mediated transport Database 0.74
Category members GO Category GO:0005876 spindle microtubule Database 0.68
Category members GO Category GO:0030496 midbody Database 0.39
Category members GO Category GO:0007264 small GTPase mediated signal transduction Database 0.37
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0006184 GTP catabolic process Database 0.29
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0019003 GDP binding Database 0.18
Category members GO Category GO:0005525 GTP binding Database 0.16
Category members GO Category GO:0003924 GTPase activity Database 0.16
Category members GO Category GO:0000910 cytokinesis Database 0.15
Category members GO Category GO:0019001 guanyl nucleotide binding Database 0.07
Category members GO Category GO:0005881 cytoplasmic microtubule Database 0.04
Category members GO Category GO:0031683 G-protein beta/gamma-subunit complex binding Database 0.02
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0001822 kidney development Database 0
Category members GO Category GO:0004871 signal transducer activity Database 0
Category members GO Category GO:0032391 photoreceptor connecting cilium Database 0
Category members GO Category GO:0042073 intraciliary transport Database 0
Category members GO Category GO:0042461 photoreceptor cell development Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0060271 cilium morphogenesis Database 0


.

© Copyright Svejstrup Laboratory 2015