RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
SFPQ	1	-1.880	4.270	0.328	0.568	-0.141	-0.140	0.032
TFEB	0	0.270	0.450
CLTC	0	0.350	-0.220	-0.538	-0.243	-0.478	0.375	0.284
PRCC	0	1.180	-0.390
PRCC	0	1.180	-0.390				-2.401	-2.302
NONO	0	-1.510	2.340	-0.053	0.223	-0.198	-0.033	-0.027
NONO	0	-1.510	2.340
ASPSCR1	0	0.610	-1.080

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ASPSCR1	Phosphorylation	S275	-0.742	-0.230	_SLSS(ph)PGGPSKPK_
ASPSCR1	Phosphorylation	S500	-1.623	-1.535	_AAGS(ph)PSPLPAPDPAPK_
ASPSCR1	Phosphorylation	S502	-2.061	-2.218	_AAGSPS(ph)PLPAPDPAPK_
CLTC	Ubiquitylation	K83	0.714		_VIALK(gl)AGK_
CLTC	Ubiquitylation	K86		0.631	_VIALKAGK(gl)_
CLTC	Ubiquitylation	K389	-1.051	-0.085	_VAANAPK(gl)GILR_
CLTC	Phosphorylation	T394	-0.123	0.181	_GILRT(ph)PDTIRR_
CLTC	Ubiquitylation	K506		0.267	_IVLYAK(gl)K_
CLTC	Ubiquitylation	K507	0.050	0.267	_IVLYAKK(gl)_
CLTC	Ubiquitylation	K619	-0.177	0.475	_AHIAQLCEK(gl)AGLLQR_
CLTC	Ubiquitylation	K737	-0.435	-0.298	_YIQAACK(gl)TGQIK_
CLTC	Ubiquitylation	K742	0.005	0.082	_TGQIK(gl)EVER_
CLTC	Ubiquitylation	K851		-0.859	_GQFSTDELVAEVEK(gl)R_
CLTC	Ubiquitylation	K911	-1.282		_YCEK(gl)RDPHLACVAYER_
CLTC	Ubiquitylation	K1118	-0.674	-0.765	_AQLQK(gl)GMVK_
CLTC	Ubiquitylation	K1209		-0.791	_CYDEK(gl)MYDAAK_
CLTC	Ubiquitylation	K1443	-2.089	-0.019	_VK(gl)QLPLVKPYLR_
CLTC	Ubiquitylation	K1449		-2.307	_QLPLVK(gl)PYLR_
CLTC	Ubiquitylation	K1516		-0.990	_IAAYLFK(gl)GNNR_
CLTC	Ubiquitylation	K1609	-0.714		_EYLTK(gl)VDKLDASESLR_
NONO	Ubiquitylation	K5	0.390	-0.727	_(ac)MQSNK(gl)TFNLEK_
NONO	Ubiquitylation	K11	0.290	-1.060	_TFNLEK(gl)QNHTPR_
NONO	Ubiquitylation	K68	-0.317		_KPGEK(gl)TFTQR_
NONO	Ubiquitylation	K96	0.095	-0.745	_KLFEK(gl)YGK_
NONO	Ubiquitylation	K99	0.301	-1.179	_YGK(gl)AGEVFIHK_
NONO	Ubiquitylation	K107		-1.009	_AGEVFIHK(gl)DK_
NONO	Ubiquitylation	K109	0.479	0.300	_DK(gl)GFGFIR_
NONO	Ubiquitylation	K190	-1.285	-2.164	_GRPSGK(gl)GIVEFSGKPAAR_
NONO	Ubiquitylation	K198	0.167	-0.607	_GIVEFSGK(gl)PAAR_
NONO	Ubiquitylation	K243	0.302	-1.020	_LVIK(gl)NQQFHK_
NONO	Ubiquitylation	K272	0.498		_WK(gl)ALIEMEK_
NONO	Ubiquitylation	K279	0.027	-0.480	_ALIEMEK(gl)QQQDQVDR_
NONO	Ubiquitylation	K336	0.158	-0.998	_MEELHNQEVQK(gl)R_
NONO	Ubiquitylation	K371	-0.098	-0.962	_RQQEGFK(gl)GTFPDAR_
NONO	Phosphorylation	T428		-2.034	_GAM(ox)PPAPVPAGTPAPPGPATMMPDGTLGLT(ph)PPTTER_
NONO	Phosphorylation	T450	0.010	-0.660	_FGQAATM(ox)EGIGAIGGT(ph)PPAFNR_
NONO	Ubiquitylation	K467	-0.128	-0.646	_AAPGAEFAPNK(gl)R_
PRCC	Phosphorylation	S157	-1.061	0.252	_IAAPELHKGDS(ph)DSEEDEPTK_
PRCC	Phosphorylation	S159	-0.308	0.452	_IAAPELHKGDSDS(ph)EEDEPTK_
PRCC	Phosphorylation	S209	0.555	-0.234	_KPS(ph)DGSPDTKPSR_
PRCC	Phosphorylation	S212	-0.631	-0.637	_KPSDGS(ph)PDTKPSR_
PRCC	Phosphorylation	T237		-0.539	_TSSLAPVVGTTT(ph)TTPSPSAIK_
PRCC	Phosphorylation	S241	-0.552	-1.061	_TSSLAPVVGTTTTTPS(ph)PSAIK_
PRCC	Ubiquitylation	K479	0.119		_NTWSENK(gl)LSR_
PRCC	Ubiquitylation	K488	0.369		_RQTQAK(gl)YGF_
SFPQ	Ubiquitylation	K271	0.191		_SEEK(gl)ISDSEGFK_
SFPQ	Phosphorylation	S273	0.863	0.625	_SEEKIS(ph)DSEGFK_
SFPQ	Ubiquitylation	K291	0.067		_RPGEK(gl)TYTQR_
SFPQ	Ubiquitylation	K330	0.013		_YGEPGEVFINK(gl)GK_
SFPQ	Ubiquitylation	K332	1.002	1.454	_GK(gl)GFGFIK_
SFPQ	Ubiquitylation	K338	0.958		_GFGFIK(gl)LESR_
SFPQ	Ubiquitylation	K413	0.957	0.529	_STGK(gl)GIVEFASKPAAR_
SFPQ	Ubiquitylation	K421	0.383	1.058	_GIVEFASK(gl)PAAR_
SFPQ	Ubiquitylation	K466	-0.093	1.182	_LAQK(gl)NPMYQK_
SFPQ	Ubiquitylation	K559	-0.148	0.186	_MEELHNQEMQK(gl)R_
SFPQ	Phosphorylation	T687		-1.833	_GMGPGT(ph)PAGYGR_
TFEB	Phosphorylation	S541		-0.724	_KDLDLMLLDDSLLPLASDPLLSTMS(ph)PEASK_
TFEB	Phosphorylation	S555	0.499	0.811	_RSSFS(ph)MEEGDVL_