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REACTOME_RESOLUTION_OF_AP_SITES_VIA_THE_SINGLE_NUCLEOTIDE_REPLACEMENT_PATHWAY
(Pathway_952)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
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Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
LIG3 1 -0.380 2.090 -0.284 0.336 0.549 0.370
TDG 1 1.400 -0.150
NTHL1 0 0.810 -0.080 1.191 1.167
XRCC1 0 -0.010 0.060 -0.364 -0.736 -0.059 0.224 0.061
APEX1 0 0.630 -0.180 -0.057 -0.077
MPG 0 0.710 -0.165 0.525
OGG1 0 -0.290 1.020
CCNO 0 -0.720 0.660

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
APEX1 Ubiquitylation K25 -0.227 _GAVAEDGDELRTEPEAKK(gl)_
APEX1 Ubiquitylation K58 -0.215 _TSPSGK(gl)PATLK_
CCNO Phosphorylation S81 -0.913 _GGS(ph)PLPGPAQPVAQLDLQTFR_
LIG3 Phosphorylation T209 -0.306 -0.552 _LTTTGQVT(ph)SPVK_
LIG3 Phosphorylation S210 -0.163 0.011 _LTTTGQVTS(ph)PVK_
LIG3 Phosphorylation S241 -0.868 -0.902 _PNNSGEAPS(ph)SPTPK_
LIG3 Phosphorylation S242 -0.782 -0.612 _FSGFSAKPNNSGEAPSS(ph)PTPK_
LIG3 Ubiquitylation K728 0.493 0.853 _WCTVTK(gl)CAGGHDDATLAR_
LIG3 Ubiquitylation K833 1.857 0.467 _ELYQLSK(gl)EK_
MPG Ubiquitylation K80 0.035 _SIYFSSPK(gl)GHLTR_
MPG Ubiquitylation K210 -0.782 _VLK(gl)DRELCSGPSK_
OGG1 Ubiquitylation K289 -2.026 _DYSWHPTTSQAK(gl)GPSPQTNK_
TDG Ubiquitylation K103 0.728 _ITDTFK(gl)VKR_
TDG Ubiquitylation K105 1.500 _ITDTFKVK(gl)_
TDG Ubiquitylation K201 -0.531 0.797 _TTPGSK(gl)DLSSK(gl)EFR_
TDG Ubiquitylation K206 0.334 1.024 _TTPGSK(gl)DLSSK(gl)EFR_
TDG Ubiquitylation K218 1.203 _ILVQK(gl)LQK_
TDG Ubiquitylation K221 1.524 _LQK(gl)YQPR_
TDG Ubiquitylation K246 0.699 1.949 _EVFGVK(gl)VK_
TDG Ubiquitylation K285 1.047 _AQDK(gl)VHYYIK_
TDG Ubiquitylation K293 1.411 _LK(gl)DLRDQLK_
TDG Ubiquitylation K300 0.980 _DQLK(gl)GIER_
XRCC1 Ubiquitylation K143 0.287 0.218 _VK(gl)IVCSQPYSK_
XRCC1 Ubiquitylation K183 0.349 _VTVTK(gl)LGQFR_
XRCC1 Phosphorylation S240 -1.676 _TSPVTASDPAGPSYAAATLQASSAASSAS(ph)PVSR_
XRCC1 Phosphorylation T249 -0.792 -0.550 _AIGST(ph)SKPQESPKGK_
XRCC1 Phosphorylation S255 -1.174 -0.626 _AIGSTSKPQES(ph)PK_
XRCC1 Phosphorylation S280 0.316 0.913 _KTPSKPPAQLS(ph)PSVPK_
XRCC1 Phosphorylation S282 0.731 _KTPSKPPAQLS(ph)PSVPK_
XRCC1 Ubiquitylation K355 0.580 _DK(gl)ALELGAK_
XRCC1 Phosphorylation S460 -1.302 -0.863 _TKPTQAAGPS(ph)SPQKPPT(ph)PEETK_
XRCC1 Phosphorylation S461 -2.007 -4.025 _TKPTQAAGPSS(ph)PQKPPTPEETK_
XRCC1 Phosphorylation T467 -1.175 -1.061 _TKPTQAAGPSS(ph)PQKPPT(ph)PEETK_
XRCC1 Phosphorylation T471 -1.661 _TKPTQAAGPSS(ph)PQKPPT(ph)PEETK_
XRCC1 Phosphorylation S475 -0.043 0.033 _AAS(ph)PVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRR_


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