RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
SCYL3	3	2.480	-1.250
GCN1L1	1	1.290	-0.930	0.125	-0.510	0.357	0.076	0.016
PPP2R1A	1	-0.260	-0.200		0.714	0.973
PPP2R1A	1	-0.260	-0.200	-0.003			-0.196	0.057
PPP2R1A	1	-0.260	-0.200		1.697	1.450	-1.553
PPP2R1B	1	1.240	-0.730		1.697	1.450	-1.553
CLASP2	1				-1.110	-0.564
CLASP2	1						0.249	0.298
ATR	1	-1.040	0.920	0.671			1.041	0.708
PIK3R4	1	1.400	-0.950	1.537			-1.555	0.077
CLASP1	0	-0.960	1.790				0.173	0.298
KPNB1	0	-1.100	2.030	0.513	-0.057	0.327	0.627	0.452
PPP4R4	0	0.620	0.190
KIAA1468	0	1.050	-0.820
TEX10	0	1.450	-0.810	-0.782	-0.026		0.257	0.225
PPP4R1	0	0.530	-0.450
DNAAF5	0	-0.090	0.240	-0.708			-0.024	0.345
CKAP5	0			0.237	-1.027	-0.242	-0.255	-0.192
IPO4	0	0.430	-0.280		-0.094	-0.970
IPO4	0	0.430	-0.280	-0.546				0.242

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATR	Ubiquitylation	K32		-0.929	_ELGSATPEEYNTVVQK(gl)PR_
ATR	Phosphorylation	S435	0.516	0.284	_RLS(ph)SSLNPSK_
ATR	Ubiquitylation	K746		-1.823	_NLK(gl)ATSQHECSSSQLK_
ATR	Ubiquitylation	K1019	1.662		_TLGK(gl)QLNVNRR_
ATR	Ubiquitylation	K1600	-0.437		_FQALK(gl)AEK_
ATR	Ubiquitylation	K2106		-0.136	_AYEWEK(gl)AGR_
ATR	Ubiquitylation	K2604	0.657	1.118	_LQGVIK(gl)TR_
CKAP5	Ubiquitylation	K1075	1.056		_DQVLAMLEK(gl)AK_
CKAP5	Ubiquitylation	K1077	1.056		_DQVLAMLEK(gl)AK_
CLASP1	Phosphorylation	S598	0.439	0.280	_S(ph)RSDIDVNAAASAK_
CLASP1	Phosphorylation	S600	0.501	0.771	_SRS(ph)DIDVNAAASAK_
CLASP1	Phosphorylation	S636	-0.434		_VSSSSGTTPFSSAAALPPGSYAS(ph)LGR_
CLASP1	Phosphorylation	S646	0.212	0.217	_RQS(ph)SGSATNVASTPDNR_
CLASP1	Phosphorylation	S797	0.478	0.348	_VLSTS(ph)TDLEAAVADALK_
CLASP1	Phosphorylation	S1091	0.125	-0.316	_NSSNTSVGS(ph)PSNTIGR_
CLASP1	Phosphorylation	S1196	0.643	0.634	_S(ph)QEDLNEPIKR_
CLASP2	Phosphorylation	S241	0.318	0.351	_DKS(ph)FDDEESVDGNRPSSAASAFK_
CLASP2	Phosphorylation	S560	0.651	0.296	_SSSSS(ph)QESLNRPFSSK_
CLASP2	Phosphorylation	S593	-0.339	0.138	_ASS(ph)LPGSLQR_
CLASP2	Phosphorylation	S601	1.688		_S(ph)RSDIDVNAAAGAK_
CLASP2	Phosphorylation	S603	0.514	0.132	_SRS(ph)DIDVNAAAGAK_
CLASP2	Phosphorylation	S758	-0.210	0.330	_IPRPSVS(ph)QGCSR_
CLASP2	Phosphorylation	S762	0.315	0.366	_IPRPSVSQGCS(ph)R_
CLASP2	Phosphorylation	T806	0.762		_VLNT(ph)GSDVEEAVADALK_
CLASP2	Phosphorylation	S808	0.347	0.264	_VLNTGS(ph)DVEEAVADALK_
CLASP2	Phosphorylation	S1264		0.155	_EAMFDDDADQFPDDLS(ph)LDHSDLVAELLK_
CLASP2	Phosphorylation	S1268		0.155	_EAMFDDDADQFPDDLS(ph)LDHSDLVAELLK_
CLASP2	Ubiquitylation	K1425	1.196	0.967	_MQTK(gl)VIER_
DNAAF5	Ubiquitylation	K43	-1.230	-0.630	_LLPGLEADSK(gl)PGR_
DNAAF5	Ubiquitylation	K750		-0.820	_IYPELLK(gl)R_
DNAAF5	Ubiquitylation	K780		-0.504	_GANAK(gl)SYYQSSVQYLYR_
GCN1L1	Ubiquitylation	K12	0.453	0.104	_(ac)AADTQVSETLK(gl)R_
GCN1L1	Ubiquitylation	K308		-0.980	_GLAGHLK(gl)SNSPR_
GCN1L1	Ubiquitylation	K695		-0.495	_MK(gl)IDPEAFITR_
GCN1L1	Ubiquitylation	K788	-0.424		_SIIQSAQQDSIK(gl)K_
GCN1L1	Ubiquitylation	K789	0.255	-0.354	_SIIQSAQQDSIKK(gl)_
GCN1L1	Ubiquitylation	K829	0.801	-0.151	_GIKEEVQLTSK(gl)QK_
GCN1L1	Ubiquitylation	K1395		-0.248	_K(gl)GAAYGLAGLVK_
GCN1L1	Ubiquitylation	K1514		-1.429	_TK(gl)AGSVELLGAMAYCAPK_
GCN1L1	Ubiquitylation	K1556	0.235		_LTEVLTDSHVKVQK(gl)_
GCN1L1	Ubiquitylation	K1679	1.567	-0.083	_TVSAK(gl)ALGAMVK_
GCN1L1	Ubiquitylation	K2183	2.095	0.580	_SK(gl)ADYTSHLR_
GCN1L1	Ubiquitylation	K2280		-0.810	_EGVLTGSPEQK(gl)EEAAK_
IPO4	Ubiquitylation	K788	-0.781	-1.033	_SCGTLTLK(gl)PPGR_
KIAA1468	Phosphorylation	S56	0.941	0.359	_LGAGSGLDPGSAGSLS(ph)PQDPVALGSSAR_
KIAA1468	Phosphorylation	S180	0.489	0.793	_AGS(ph)ISTLDSLDFAR_
KIAA1468	Phosphorylation	S453	-0.773	0.078	_ENS(ph)PNSFPR_
KPNB1	Ubiquitylation	K68	0.403	0.420	_NSLTSK(gl)DPDIK_
KPNB1	Ubiquitylation	K73		-0.134	_NSLTSKDPDIK(gl)AQYQQR_
KPNB1	Ubiquitylation	K211	-0.036		_ANFDK(gl)ESER_
KPNB1	Ubiquitylation	K549	-0.563		_DCYPAVQK(gl)TTLVIMER_
KPNB1	Ubiquitylation	K835	-0.212	0.450	_DVLK(gl)LVEAR_
KPNB1	Ubiquitylation	K859		0.118	_AK(gl)TLATWATK_
KPNB1	Ubiquitylation	K867	0.636	1.498	_TLATWATK(gl)ELR_
PPP2R1A	Ubiquitylation	K34	0.304		_K(gl)LSTIALALGVER_
PPP2R1A	Ubiquitylation	K107	0.584	0.441	_DK(gl)AVESLR_
PPP2R1A	Ubiquitylation	K163	0.106	0.149	_VSSAVK(gl)AELR_
PPP2R1A	Ubiquitylation	K175		-0.351	_ASNAVK(gl)AEIR_
PPP2R1A	Ubiquitylation	K188	0.395	0.130	_AAASK(gl)LGEFAK_
PPP2R1A	Ubiquitylation	K255	0.301	0.202	_QAAEDK(gl)SWR_
PPP2R1A	Ubiquitylation	K266	0.464	0.338	_YMVADK(gl)FTELQK_
PPP2R1A	Ubiquitylation	K284		-0.575	_FSELQK(gl)AMGPK_
PPP2R1A	Ubiquitylation	K307	0.224	0.500	_VK(gl)EFCENLSADCR_
PPP2R1A	Ubiquitylation	K467		0.890	_EAATSNLK(gl)K_
PPP2R1A	Ubiquitylation	K468		0.890	_EAATSNLK(gl)K_
PPP2R1A	Ubiquitylation	K542		-0.187	_FNVAK(gl)SLQK_
PPP2R1B	Ubiquitylation	K175		-0.351	_ASNAVK(gl)AEIR_
PPP2R1B	Ubiquitylation	K284		-0.575	_FSELQK(gl)AMGPK_
PPP4R1	Ubiquitylation	K887	0.143		_VLLAK(gl)TLR_
PPP4R4	Phosphorylation	S775	1.373	1.052	_SQS(ph)FNNQAFHAK_
SCYL3	Phosphorylation	Y364	0.926		_(ac)MVLLSHIEAY(ph)VEHFT(ph)QEQLK_
SCYL3	Phosphorylation	T369	0.926		_(ac)MVLLSHIEAY(ph)VEHFT(ph)QEQLK_
SCYL3	Phosphorylation	S707	2.283	2.580	_KDDVS(ph)PVMQFSSK_