RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
USP13	1	0.350	0.240	-1.142				0.643
USP13	1	0.350	0.240
USP5	1	0.450	-0.520	-1.142				0.643
USP39	1	-0.890	1.910	0.215	0.205	0.107	-0.550	-0.100
USP33	0	0.750	-0.150
BRAP	0	1.580	-1.050
USP22	0	-1.620	2.280	-0.102			-0.073	-0.208
USP20	0	-0.010	-0.210
USP3	0	0.220	-0.540
USP16	0	-0.680	1.390

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BRAP	Phosphorylation	S157	0.033	-0.074	_ECINAAPDS(ph)PSK_
BRAP	Phosphorylation	S159	-0.208	-0.105	_ECINAAPDSPS(ph)K_
BRAP	Ubiquitylation	K425	0.929		_TDGK(gl)IVQYECEGDTCQEEK_
BRAP	Ubiquitylation	K466	0.347		_IYWENK(gl)IVR_
USP13	Ubiquitylation	K163	0.116	1.146	_K(gl)QEVQAWDGEVR_
USP13	Ubiquitylation	K184	-0.042	-0.044	_HAFSLK(gl)QLDNPAR_
USP13	Ubiquitylation	K328	0.320	0.109	_LK(gl)PMYGPGYTGLK_
USP13	Ubiquitylation	K353	1.225		_K(gl)YVDKLEK_
USP13	Ubiquitylation	K357	0.847		_YVDK(gl)LEK_
USP13	Ubiquitylation	K418	0.291	0.339	_MFK(gl)ALIGK_
USP13	Ubiquitylation	K423	0.440	-0.090	_ALIGK(gl)GHPEFSTNR_
USP13	Ubiquitylation	K430	0.505	0.308	_MFK(gl)AFVSK_
USP13	Ubiquitylation	K435	-0.932	-0.715	_AFVSK(gl)SHPEFSSNR_
USP13	Ubiquitylation	K468	0.433		_FLVEEK(gl)IK_
USP13	Ubiquitylation	K470	-0.606	0.287	_IK(gl)CLATEK_
USP13	Ubiquitylation	K478	0.243	0.990	_CLATEKVK(gl)_
USP13	Ubiquitylation	K558	0.626	0.552	_SVAVK(gl)TTR_
USP13	Phosphorylation	T623	1.685	0.623	_GTGLQPGEEELPDIAPPLVT(ph)PDEPK_
USP13	Ubiquitylation	K743	0.438	1.356	_DQALK(gl)ALR_
USP13	Ubiquitylation	K793	-0.216	0.033	_SAADSISESVPVGPK(gl)VR_
USP16	Ubiquitylation	K37	-0.731	0.604	_GLEQGNLK(gl)K_
USP16	Phosphorylation	S415	0.456	0.759	_TVEDEDQDS(ph)EEEKDNDSYIK_
USP16	Ubiquitylation	K437	0.171	0.056	_SDIPSGTSK(gl)HLQK_
USP16	Phosphorylation	S551		0.904	_NINMDNDLEVLTS(ph)SPTR_
USP16	Phosphorylation	S552	0.397	0.707	_NINM(ox)DNDLEVLTSS(ph)PTR_
USP16	Phosphorylation	T554		1.067	_NINMDNDLEVLTSSPT(ph)R_
USP16	Ubiquitylation	K764	0.748	-1.310	_SGHYTAYAK(gl)AR_
USP20	Phosphorylation	S132	-0.292	-0.107	_AVPIAVADEGES(ph)ESEDDDLKPR_
USP20	Phosphorylation	S134	-0.317	-0.295	_AVPIAVADEGESES(ph)EDDDLKPR_
USP20	Phosphorylation	S305	0.041	1.231	_GGGSS(ph)QAETELLIPDEAGR_
USP22	Ubiquitylation	K35		0.350	_VDNWK(gl)QNLR_
USP22	Ubiquitylation	K152	-1.310	-0.895	_FSTWEPTK(gl)R_
USP22	Ubiquitylation	K159	-0.035	-0.557	_ELELLK(gl)HNPK_
USP22	Ubiquitylation	K166	-0.657	-0.098	_K(gl)ITSNCTIGLR_
USP22	Ubiquitylation	K382	-0.028	-1.061	_IK(gl)CSGCHSYQESTK_
USP3	Ubiquitylation	K354	-0.895		_SK(gl)NQENGPVCSLR_
USP3	Ubiquitylation	K423		-0.875	_NK(gl)VDTYVEFPLR_
USP33	Ubiquitylation	K371		-0.567	_MCNK(gl)INK_
USP33	Ubiquitylation	K882	-0.583	0.278	_IAVTK(gl)CGNVMLR_
USP39	Phosphorylation	S43	-0.046	1.159	_EPEAASS(ph)RGSPVR_
USP39	Phosphorylation	S46	1.807	0.030	_EPEAASSRGS(ph)PVR_
USP39	Phosphorylation	S82	0.415	0.295	_EVDEDS(ph)EPEREVR_
USP5	Ubiquitylation	K163	0.116	1.146	_K(gl)QEVQAWDGEVR_
USP5	Ubiquitylation	K184	-0.042	-0.044	_HAFSLK(gl)QLDNPAR_
USP5	Ubiquitylation	K353	1.225		_K(gl)YVDKLEK_
USP5	Ubiquitylation	K357	0.847		_YVDK(gl)LEK_
USP5	Ubiquitylation	K418	0.291	0.339	_MFK(gl)ALIGK_
USP5	Ubiquitylation	K423	0.440	-0.090	_ALIGK(gl)GHPEFSTNR_
USP5	Ubiquitylation	K468	0.433		_FLVEEK(gl)IK_
USP5	Ubiquitylation	K470	-0.606	0.287	_IK(gl)CLATEK_
USP5	Ubiquitylation	K478	0.243	0.990	_CLATEKVK(gl)_
USP5	Ubiquitylation	K558	0.626	0.552	_SVAVK(gl)TTR_
USP5	Phosphorylation	T623	1.685	0.623	_GTGLQPGEEELPDIAPPLVT(ph)PDEPK_
USP5	Ubiquitylation	K743	0.438	1.356	_DQALK(gl)ALR_
USP5	Ubiquitylation	K793	-0.216	0.033	_SAADSISESVPVGPK(gl)VR_