Results for the Category
paraspeckles
(GO:0042382)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| HNRNPM | 2 | 0.210 | -0.550 | -0.689 | -1.927 | -0.440 | -0.803 | -0.188 |
| SFPQ | 1 | -1.880 | 4.270 | 0.328 | 0.568 | -0.141 | -0.140 | 0.032 |
| CPSF6 | 0 | -0.660 | 0.180 | 1.002 | 0.250 | 0.499 | 0.312 | -0.256 |
| PSPC1 | 0 | 0.060 | -0.110 | 0.129 | 0.098 | -0.600 | -0.523 | -0.156 |
| NONO | 0 | -1.510 | 2.340 | -0.053 | 0.223 | -0.198 | -0.033 | -0.027 |
| NONO | 0 | -1.510 | 2.340 | |||||
| NUDT21 | 0 | -0.700 | 0.830 | 0.214 | -0.359 | 0.236 | 0.333 | 0.307 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| CPSF6 | Ubiquitylation | K79 | -0.081 | _GAAPNVVYTYTGK(gl)R_ | |
| CPSF6 | Ubiquitylation | K138 | 0.018 | _GFALVGVGSEASSK(gl)K_ | |
| CPSF6 | Ubiquitylation | K139 | -0.782 | _GFALVGVGSEASSKK(gl)_ | |
| CPSF6 | Ubiquitylation | K185 | -0.516 | -0.824 | _TTQSGQMSGEGK(gl)AGPPGGSSR_ |
| CPSF6 | Phosphorylation | T404 | 1.179 | 1.083 | _EMDT(ph)ARTPLSEAEFEEIMNR_ |
| CPSF6 | Phosphorylation | T407 | 1.386 | 1.306 | _EMDTART(ph)PLSEAEFEEIMNR_ |
| HNRNPM | Ubiquitylation | K69 | -0.327 | -0.144 | _GGNRFEPYANPTK(gl)R_ |
| HNRNPM | Ubiquitylation | K88 | 0.540 | 0.868 | _WQSLK(gl)DLVK_ |
| HNRNPM | Ubiquitylation | K134 | 0.163 | _AAEVLNK(gl)HSLSGRPLK_ | |
| HNRNPM | Ubiquitylation | K239 | 0.592 | _ADILEDK(gl)DGK_ | |
| HNRNPM | Ubiquitylation | K242 | -0.071 | -0.112 | _ADILEDKDGK(gl)SR_ |
| HNRNPM | Ubiquitylation | K381 | 1.140 | 1.108 | _INEILSNALK(gl)R_ |
| HNRNPM | Ubiquitylation | K388 | 0.534 | 0.382 | _RGEIIAK(gl)QGGGGGGGSVPGIER_ |
| HNRNPM | Phosphorylation | S452 | 3.711 | _MGS(ph)GIER_ | |
| HNRNPM | Phosphorylation | S528 | 1.314 | 0.912 | _MGLS(ph)MER_ |
| HNRNPM | Phosphorylation | S575 | 0.835 | 1.331 | _MGANS(ph)LER_ |
| HNRNPM | Phosphorylation | S618 | 1.486 | 0.753 | _MGLAMGGGGGAS(ph)FDR_ |
| HNRNPM | Ubiquitylation | K651 | 1.734 | 1.372 | _K(gl)ACQIFVR_ |
| HNRNPM | Ubiquitylation | K698 | 0.670 | 0.201 | _GCGVVK(gl)FESPEVAER_ |
| HNRNPM | Phosphorylation | S701 | -0.135 | -0.167 | _FES(ph)PEVAER_ |
| HNRNPM | Ubiquitylation | K716 | 0.926 | 0.990 | _MMNGMK(gl)LSGR_ |
| NONO | Ubiquitylation | K5 | 0.390 | -0.727 | _(ac)MQSNK(gl)TFNLEK_ |
| NONO | Ubiquitylation | K11 | 0.290 | -1.060 | _TFNLEK(gl)QNHTPR_ |
| NONO | Ubiquitylation | K68 | -0.317 | _KPGEK(gl)TFTQR_ | |
| NONO | Ubiquitylation | K96 | 0.095 | -0.745 | _KLFEK(gl)YGK_ |
| NONO | Ubiquitylation | K99 | 0.301 | -1.179 | _YGK(gl)AGEVFIHK_ |
| NONO | Ubiquitylation | K107 | -1.009 | _AGEVFIHK(gl)DK_ | |
| NONO | Ubiquitylation | K109 | 0.479 | 0.300 | _DK(gl)GFGFIR_ |
| NONO | Ubiquitylation | K190 | -1.285 | -2.164 | _GRPSGK(gl)GIVEFSGKPAAR_ |
| NONO | Ubiquitylation | K198 | 0.167 | -0.607 | _GIVEFSGK(gl)PAAR_ |
| NONO | Ubiquitylation | K243 | 0.302 | -1.020 | _LVIK(gl)NQQFHK_ |
| NONO | Ubiquitylation | K272 | 0.498 | _WK(gl)ALIEMEK_ | |
| NONO | Ubiquitylation | K279 | 0.027 | -0.480 | _ALIEMEK(gl)QQQDQVDR_ |
| NONO | Ubiquitylation | K336 | 0.158 | -0.998 | _MEELHNQEVQK(gl)R_ |
| NONO | Ubiquitylation | K371 | -0.098 | -0.962 | _RQQEGFK(gl)GTFPDAR_ |
| NONO | Phosphorylation | T428 | -2.034 | _GAM(ox)PPAPVPAGTPAPPGPATMMPDGTLGLT(ph)PPTTER_ | |
| NONO | Phosphorylation | T450 | 0.010 | -0.660 | _FGQAATM(ox)EGIGAIGGT(ph)PPAFNR_ |
| NONO | Ubiquitylation | K467 | -0.128 | -0.646 | _AAPGAEFAPNK(gl)R_ |
| NUDT21 | Ubiquitylation | K29 | -0.121 | -0.076 | _YIQQTK(gl)PLTLER_ |
| NUDT21 | Ubiquitylation | K56 | -1.058 | 0.450 | _EPLYEK(gl)DSSVAAR_ |
| NUDT21 | Ubiquitylation | K73 | 0.158 | _MREEFDK(gl)IGMR_ | |
| NUDT21 | Ubiquitylation | K122 | -1.445 | _LPGGELNPGEDEVEGLK(gl)R_ | |
| NUDT21 | Ubiquitylation | K189 | -0.510 | _ALFAVPK(gl)NYK_ | |
| NUDT21 | Ubiquitylation | K192 | -0.730 | -0.836 | _ALFAVPKNYK(gl)_ |
| PSPC1 | Ubiquitylation | K8 | 0.540 | _GNLK(gl)QVR_ | |
| SFPQ | Ubiquitylation | K271 | 0.191 | _SEEK(gl)ISDSEGFK_ | |
| SFPQ | Phosphorylation | S273 | 0.863 | 0.625 | _SEEKIS(ph)DSEGFK_ |
| SFPQ | Ubiquitylation | K291 | 0.067 | _RPGEK(gl)TYTQR_ | |
| SFPQ | Ubiquitylation | K330 | 0.013 | _YGEPGEVFINK(gl)GK_ | |
| SFPQ | Ubiquitylation | K332 | 1.002 | 1.454 | _GK(gl)GFGFIK_ |
| SFPQ | Ubiquitylation | K338 | 0.958 | _GFGFIK(gl)LESR_ | |
| SFPQ | Ubiquitylation | K413 | 0.957 | 0.529 | _STGK(gl)GIVEFASKPAAR_ |
| SFPQ | Ubiquitylation | K421 | 0.383 | 1.058 | _GIVEFASK(gl)PAAR_ |
| SFPQ | Ubiquitylation | K466 | -0.093 | 1.182 | _LAQK(gl)NPMYQK_ |
| SFPQ | Ubiquitylation | K559 | -0.148 | 0.186 | _MEELHNQEMQK(gl)R_ |
| SFPQ | Phosphorylation | T687 | -1.833 | _GMGPGT(ph)PAGYGR_ |
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