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Query: PSPC1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PSPC1 0 -0.010 0.060 -0.110 0.129 0.098 -0.600 -0.523 -0.156

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PSPC1 Ubiquitylation K8 0.540 _GNLK(gl)QVR_

Background Information for PSPC1:


Pubmed-PSPC1 »
Uniprot-PSPC1 »
Biogrid-PSPC1 »
ProteomicsDB-PSPC1 »

Tumorportal-PSPC1 »
COSMIC-PSPC1 »
GenomeRNAi-PSPC1 »
Genecards-PSPC1


Protein-protein Interactions for PSPC1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait EEA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait CCDC22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NONO Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ORC6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SFPQ Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PSPC1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34
Category members NOPS IPR012975 0


Protein complexes (CORUM database) featuring PSPC1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PSPC1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members DDR Literature pubmedid:TBD2_UV_increased Elia et al, 2015 UV increased acetylation events Elia et al. INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0016607 nuclear speck Database 4.84
Category members GO Category GO:0016363 nuclear matrix Database 1.89
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0042382 paraspeckles Database 0.23
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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