bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
HOPS complex
(GO:0030897)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
VPS33A 1 1.740 -0.870 0.283
AKTIP 1 -1.660 2.970
VPS33B 1 0.750 -0.120
VPS41 0 -0.880 1.290 0.189
VPS18 0 -0.130 -0.260 -0.775 -0.482
HOOK1 0 1.180 -1.060
VIPAS39 0 -0.350 0.330
VPS16 0 0.140 0.080 -0.408 -0.029

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
AKTIP Phosphorylation T29 0.157 _TLTGDVKT(ph)SPPR_
AKTIP Phosphorylation S30 0.157 0.228 _TLTGDVKTS(ph)PPR_
HOOK1 Ubiquitylation K424 -0.352 _DTLK(gl)ETNEELR_
HOOK1 Ubiquitylation K612 -0.788 _MYLEK(gl)AR_
HOOK1 Ubiquitylation K678 0.231 _SLAFQK(gl)LGMESR_
HOOK1 Phosphorylation S719 -0.815 -0.265 _NLS(ph)VKVPATTSD_
VIPAS39 Phosphorylation S147 1.367 1.257 _TRPGS(ph)FQSLSDALSDTPAK_
VPS16 Ubiquitylation K510 -0.970 -1.022 _AINQK(gl)LGDTPGVSYSDIAAR_
VPS18 Ubiquitylation K46 -1.029 _EVPIFTK(gl)QR_
VPS33A Ubiquitylation K67 7.613 _MFTLK(gl)GNR_
VPS33A Ubiquitylation K313 -1.029 _DKNFNAVGSVLSK(gl)K_
VPS33A Ubiquitylation K314 -1.029 _DKNFNAVGSVLSK(gl)K_
VPS33B Ubiquitylation K321 1.641 _GMDIK(gl)QMK_
VPS33B Ubiquitylation K480 -0.791 _ITDAFSSLAK(gl)R_
VPS33B Ubiquitylation K504 -0.823 -0.779 _VDGEYDLK(gl)VPR_


© Copyright Svejstrup Laboratory 2015