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Query: VPS41

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VPS41 0 1.479 -0.880 1.290 0.189

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for VPS41:


Pubmed-VPS41 »
Uniprot-VPS41 »
Biogrid-VPS41 »
ProteomicsDB-VPS41 »

Tumorportal-VPS41 »
COSMIC-VPS41 »
GenomeRNAi-VPS41 »
Genecards-VPS41


Protein-protein Interactions for VPS41
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait JARID1C;KDM5C Cat. description Hein, Mann, Cell 2015
Category members IP bait MAX Cat. description Hein, Mann, Cell 2015
Category members IP bait NABP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TCEAL4 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS16 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS18 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS41 Cat. description Hein, Mann, Cell 2015
Category members IP bait CXorf48 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TECPR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS41 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in VPS41
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ARM-type_fold IPR016024 9.26
Category members WD40_repeat_dom IPR017986 1.39
Category members Clathrin_H-chain/VPS_repeat IPR000547 0
Category members Znf_RING IPR001841 0
Category members VPS39/TGF_beta_rcpt-assoc_2 IPR019453 0


Protein complexes (CORUM database) featuring VPS41
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring VPS41
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005488 binding Database 9.32
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0005769 early endosome Database 1.26
Category members GO Category GO:0005874 microtubule Database 1.21
Category members GO Category GO:0016192 vesicle-mediated transport Database 1.1
Category members GO Category GO:0005765 lysosomal membrane Database 0.82
Category members GO Category GO:0008017 microtubule binding Database 0.79
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0048193 Golgi vesicle transport Database 0.19
Category members GO Category GO:0030897 HOPS complex Database 0.13
Category members GO Category GO:0005770 late endosome Database 0.09
Category members GO Category GO:0003674 molecular_function Database 0.08
Category members GO Category GO:0005798 Golgi-associated vesicle Database 0.04
Category members GO Category GO:0008150 biological_process Database 0


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