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Query: VIPAS39

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VIPAS39 0 2.954 -0.350 0.330

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
VIPAS39 Phosphorylation S147 1.367 1.257 _TRPGS(ph)FQSLSDALSDTPAK_

Background Information for VIPAS39:


Pubmed-VIPAS39 »
Uniprot-VIPAS39 »
Biogrid-VIPAS39 »
ProteomicsDB-VIPAS39 »

Tumorportal-VIPAS39 »
COSMIC-VIPAS39 »
GenomeRNAi-VIPAS39 »
Genecards-VIPAS39


Protein-protein Interactions for VIPAS39
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in VIPAS39
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Golgin_subfamily_A_member_5 IPR019177 0.23


Protein complexes (CORUM database) featuring VIPAS39
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring VIPAS39
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0005769 early endosome Database 1.26
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0008333 endosome to lysosome transport Database 0.49
Category members GO Category GO:0055037 recycling endosome Database 0.29
Category members Disease phenotype Arthrogryposis_-_renal_dysfunction_-_cholestasis Arthrogryposis - renal dysfunction - cholestasis Database 0.24
Category members GO Category GO:0016023 cytoplasmic membrane-bounded vesicle Database 0.17
Category members GO Category GO:0030897 HOPS complex Database 0.13
Category members GO Category GO:0005770 late endosome Database 0.09
Category members GO Category GO:0030154 cell differentiation Database 0.06
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007283 spermatogenesis Database 0


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