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Query: VPS16

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VPS16 0 -2.429 0.140 0.080 -0.408 -0.029

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
VPS16 Ubiquitylation K510 -0.970 -1.022 _AINQK(gl)LGDTPGVSYSDIAAR_

Background Information for VPS16:


Pubmed-VPS16 »
Uniprot-VPS16 »
Biogrid-VPS16 »
ProteomicsDB-VPS16 »

Tumorportal-VPS16 »
COSMIC-VPS16 »
GenomeRNAi-VPS16 »
Genecards-VPS16


Protein-protein Interactions for VPS16
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait VPS11 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS16 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS18 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS41 Cat. description Hein, Mann, Cell 2015
Category members IP bait CXorf48 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EPHA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM167A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LYPD4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MOCS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PKNOX1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TECPR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS41 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in VPS16
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring VPS16
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 944 Class C Vps complex (VPS11, VPS18, VPS16) Database 0.34
Category members Corum 2573 Class C VPS/HOPS complex Database 0


Categories featuring VPS16
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0003779 actin binding Database 5.41
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0005769 early endosome Database 1.26
Category members GO Category GO:0051015 actin filament binding Database 0.99
Category members GO Category GO:0005765 lysosomal membrane Database 0.82
Category members GO Category GO:0005768 endosome Database 0.29
Category members GO Category GO:0055037 recycling endosome Database 0.29
Category members GO Category GO:0030424 axon Database 0.23
Category members GO Category GO:0030897 HOPS complex Database 0.13
Category members GO Category GO:0005770 late endosome Database 0.09
Category members GO Category GO:0005884 actin filament Database 0.08
Category members GO Category GO:0031902 late endosome membrane Database 0
Category members GO Category GO:0043025 neuronal cell body Database 0


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