RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PARP1	2
PARP1	2			-0.200	0.357	0.412	0.442	0.293
MSX2	1	-0.260	0.240
GATA4	0	-0.670	0.350
MSX1	0	0.420	-0.450
T	0	0.200	-0.340	-0.755
SMAD3	0	-1.560	1.800
SMAD3	0	0.270	-0.340
SMAD2	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
GATA4	Phosphorylation	S109	-0.520	-0.425	_FS(ph)FPGTTGSLAAAAAAAAAR_
GATA4	Phosphorylation	S407	-0.185	0.124	_LS(ph)PQGYASPVSQSPQTSSK_
MSX1	Phosphorylation	S154		0.148	_RLS(ph)PPACTLR_
MSX2	Phosphorylation	S3	-1.986	-1.774	_(ac)AS(ph)PSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S5	-1.986		_AS(ph)PS(ph)KGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S63		3.351	_EAS(ph)PLPAESASAGATLRPLLLSGHGAR_
MSX2	Phosphorylation	S91	-0.783	-0.727	_EAHS(ph)PGPLVKPFETASVK_
MSX2	Phosphorylation	S123		-0.062	_SENSEDGAAWMQEPGRYS(ph)PPPR_
PARP1	Phosphorylation	S41		-0.803	_MAIMVQS(ph)PMFDGK_
PARP1	Ubiquitylation	K84	1.223		_WDDQQK(gl)VK_
PARP1	Ubiquitylation	K86	1.058		_VK(gl)KTAEAGGVTGK_
PARP1	Ubiquitylation	K87	1.058		_VK(gl)KTAEAGGVTGK_
PARP1	Ubiquitylation	K97	1.386	0.406	_TAEAGGVTGK(gl)GQDGIGSK_
PARP1	Ubiquitylation	K105	0.828		_GQDGIGSK(gl)AEK_
PARP1	Ubiquitylation	K108	1.317		_GQDGIGSKAEK(gl)_
PARP1	Ubiquitylation	K119	1.569		_TLGDFAAEYAK(gl)SNR_
PARP1	Ubiquitylation	K131	1.025	1.620	_GCMEK(gl)IEK_
PARP1	Ubiquitylation	K197	0.445	1.157	_K(gl)QLPGVK_
PARP1	Ubiquitylation	K254	0.589		_AQNDLIWNIKDELKK(gl)_
PARP1	Ubiquitylation	K262	0.456		_VCSTNDLK(gl)ELLIFNK_
PARP1	Ubiquitylation	K320	1.464	1.034	_SDAYYCTGDVTAWTK(gl)CMVK_
PARP1	Ubiquitylation	K331	-0.425	-0.480	_TQTPNRK(gl)EWVTPK_
PARP1	Ubiquitylation	K337	0.462	0.332	_EWVTPK(gl)EFR_
PARP1	Ubiquitylation	K346	0.370	0.411	_EISYLK(gl)K_
PARP1	Phosphorylation	T368	-1.474	-1.410	_IFPPETSASVAAT(ph)PPPSTASAPAAVNSSASADKPLSNM(ox)K_
PARP1	Ubiquitylation	K400	0.844	1.095	_ILTLGK(gl)LSR_
PARP1	Ubiquitylation	K414	1.227	1.241	_AMIEK(gl)LGGK_
PARP1	Ubiquitylation	K418	1.131		_LGGK(gl)LTGTANK_
PARP1	Ubiquitylation	K425	0.912	0.815	_LTGTANK(gl)ASLCISTKK_
PARP1	Ubiquitylation	K433	0.942		_ASLCISTK(gl)K_
PARP1	Ubiquitylation	K434		0.020	_ASLCISTKK(gl)_
PARP1	Ubiquitylation	K447	1.480		_MEEVK(gl)EANIR_
PARP1	Ubiquitylation	K518	0.108		_GQVKEEGINK(gl)SEK_
PARP1	Ubiquitylation	K521	0.630		_GQVKEEGINKSEK(gl)R_
PARP1	Ubiquitylation	K548	0.125	-0.480	_GGAAVDPDSGLEHSAHVLEK(gl)GGK_
PARP1	Ubiquitylation	K551	0.492	-0.573	_GGAAVDPDSGLEHSAHVLEKGGK(gl)_
PARP1	Ubiquitylation	K629	1.632		_TGNAWHSK(gl)NFTK_
PARP1	Ubiquitylation	K633	0.964	0.091	_NFTK(gl)YPK_
PARP1	Ubiquitylation	K654	-0.086		_K(gl)LTVNPGTK_
PARP1	Ubiquitylation	K662	0.112		_LTVNPGTK(gl)SK_
PARP1	Ubiquitylation	K664	-0.042	-0.111	_LTVNPGTKSK(gl)_
PARP1	Ubiquitylation	K683	0.983	1.355	_MIFDVESM(ox)K(gl)K_
PARP1	Ubiquitylation	K684	1.213	1.355	_MIFDVESMKK(gl)_
PARP1	Ubiquitylation	K700	0.448		_MPLGK(gl)LSK_
PARP1	Phosphorylation	S782	0.648	0.490	_GGS(ph)DDSSKDPIDVNYEK_
PARP1	Ubiquitylation	K949	0.738		_HSVK(gl)GLGK_
SMAD2	Phosphorylation	T8	-0.896	-0.885	_(ac)SSILPFT(ph)PPVVK_
SMAD2	Ubiquitylation	K13	-0.058		_(ac)SSILPFTPPVVK(gl)R_
SMAD3	Ubiquitylation	K13	-0.704		_(ac)SSILPFTPPIVK(gl)R_