Results for the Category
AU-rich element binding
(GO:0017091)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| ELAVL1 | 1 | -0.160 | 0.190 | -0.309 | -1.620 | -0.465 | -0.437 | 0.244 |
| EXOSC8 | 1 | -2.330 | 4.300 | 0.175 | ||||
| ZFP36 | 1 | -1.860 | 3.010 | |||||
| TIA1 | 0 | -1.050 | 1.250 | |||||
| TIA1 | 0 | -1.050 | 1.250 | -0.721 | -0.259 | -0.319 | -0.332 | -0.199 |
| TIA1 | 0 | -1.050 | 1.250 | -0.455 | 0.130 | 0.623 | ||
| EXOSC9 | 0 | 0.080 | 0.519 | 0.128 | -0.495 | 0.107 | ||
| TIAL1 | 0 | -0.540 | 0.100 | |||||
| TIAL1 | 0 | -0.540 | 0.100 | -0.721 | -0.259 | -0.319 | -0.332 | -0.199 |
| NUDT21 | 0 | -0.700 | 0.830 | 0.214 | -0.359 | 0.236 | 0.333 | 0.307 |
| HNRNPA0 | 0 | 0.550 | -0.730 | 0.276 | -0.741 | 0.103 | ||
| ELAVL3 | 0 | 1.020 | -0.910 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| ELAVL1 | Ubiquitylation | K116 | 1.733 | _LQSK(gl)TIK_ | |
| ELAVL1 | Ubiquitylation | K119 | 1.073 | _TIK(gl)VSYAR_ | |
| ELAVL1 | Ubiquitylation | K131 | -0.134 | _PSSEVIK(gl)DANLYISGLPR_ | |
| ELAVL1 | Ubiquitylation | K147 | 0.592 | 1.144 | _TMTQK(gl)DVEDMFSR_ |
| ELAVL1 | Phosphorylation | S224 | -1.255 | _NVALLS(ph)QLYHSPARR_ | |
| ELAVL1 | Phosphorylation | S229 | -1.194 | -0.793 | _NVALLSQLYHS(ph)PAR_ |
| ELAVL1 | Ubiquitylation | K347 | 1.756 | 0.731 | _ILQVSFK(gl)TNK_ |
| ELAVL3 | Phosphorylation | S358 | 1.100 | 1.114 | _VLQVS(ph)FKTSK_ |
| EXOSC8 | Ubiquitylation | K6 | -0.039 | -1.840 | _(ac)AAGFK(gl)TVEPLEYYRR_ |
| EXOSC8 | Ubiquitylation | K19 | 0.825 | _FLK(gl)ENCRPDGR_ | |
| EXOSC9 | Ubiquitylation | K52 | 0.195 | _ISFGTDYGCCIVELGK(gl)TR_ | |
| EXOSC9 | Phosphorylation | S306 | 0.254 | 0.180 | _APIDTS(ph)DVEEK_ |
| HNRNPA0 | Phosphorylation | S84 | 0.945 | _AVS(ph)REDSARPGAHAK_ | |
| HNRNPA0 | Ubiquitylation | K133 | 0.192 | 0.129 | _AEIIADK(gl)QSGK_ |
| HNRNPA0 | Ubiquitylation | K138 | -0.379 | -0.162 | _AEIIADKQSGKK(gl)_ |
| NUDT21 | Ubiquitylation | K29 | -0.121 | -0.076 | _YIQQTK(gl)PLTLER_ |
| NUDT21 | Ubiquitylation | K56 | -1.058 | 0.450 | _EPLYEK(gl)DSSVAAR_ |
| NUDT21 | Ubiquitylation | K73 | 0.158 | _MREEFDK(gl)IGMR_ | |
| NUDT21 | Ubiquitylation | K122 | -1.445 | _LPGGELNPGEDEVEGLK(gl)R_ | |
| NUDT21 | Ubiquitylation | K189 | -0.510 | _ALFAVPK(gl)NYK_ | |
| NUDT21 | Ubiquitylation | K192 | -0.730 | -0.836 | _ALFAVPKNYK(gl)_ |
| TIA1 | Ubiquitylation | K91 | 0.902 | _VNWATTPSSQKK(gl)_ | |
| TIAL1 | Ubiquitylation | K91 | 0.902 | _VNWATTPSSQKK(gl)_ | |
| TIAL1 | Ubiquitylation | K122 | 0.503 | 0.809 | _SAFAPFGK(gl)ISDAR_ |
| ZFP36 | Phosphorylation | S93 | -0.357 | _LGPELSPSPTS(ph)PTATSTTPSR_ | |
| ZFP36 | Phosphorylation | T95 | -0.633 | -0.624 | _LGPELSPSPTSPT(ph)ATSTTPSR_ |
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© Copyright Svejstrup Laboratory 2015