RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ERCC6	4	-1.310	2.800	5.118			1.227	2.135
ERCC6	4	0.480	0.030	5.118			1.227	2.135
ERCC6	4	-1.310	2.800		0.074	0.258
ERCC6	4	0.480	0.030		0.074	0.258
CDK9	2	-1.000	1.130	2.047	1.362	1.840	1.146	0.280
TCEA2	2	2.720	-1.240	-0.119	0.977	2.240	-0.032	0.136
TCEA2	2	2.720	-1.240
IKBKAP	0	-0.760	1.050	0.446	0.516	-0.004	0.427	0.134
ELL	0	0.700	0.150	-0.733
ELP4	0	1.540	-0.580
TTF2	0	-1.140	2.160	-0.431			0.525	0.080
ELL3	0	-0.260	0.230
ELP3	0	-0.130	0.500
ELP3	0	-0.130	0.500	0.575
ELP2	0	0.130	-0.470	0.142

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CDK9	Ubiquitylation	K35		-0.042	_IGQGTFGEVFK(gl)AR_
CDK9	Ubiquitylation	K151		-0.345	_DMK(gl)AANVLITR_
CDK9	Ubiquitylation	K178	-0.409	-1.058	_AFSLAK(gl)NSQPNR_
CDK9	Ubiquitylation	K269		-1.874	_LELVK(gl)GQK_
ELL	Phosphorylation	S308	-0.101	-0.337	_LCQPQSTGSLLGDPAAS(ph)SPPGER_
ELL	Phosphorylation	S309	-0.151	-0.339	_LCQPQSTGSLLGDPAASS(ph)PPGER_
ELL	Phosphorylation	S437	-0.591	-0.813	_LGLPLLTDCAQPS(ph)RPHGSPSR_
ELL	Phosphorylation	S442	-0.565	-0.678	_LGLPLLTDCAQPSRPHGS(ph)PSR_
ELL3	Ubiquitylation	K229	-2.474	-3.642	_SVPVATVELEEK(gl)R_
ELL3	Ubiquitylation	K358	-1.671		_IIQEYKK(gl)_
ELP2	Ubiquitylation	K484		-0.739	_LFAPWK(gl)R_
ELP2	Ubiquitylation	K524	0.072	-0.086	_FQFVSGADEK(gl)VLR_
ELP3	Ubiquitylation	K5	0.857	-0.808	_LK(gl)AKPIR_
ELP3	Ubiquitylation	K34	0.744		_QLIEAHEQGK(gl)DIDLNK_
ELP3	Ubiquitylation	K40	0.708		_DIDLNK(gl)VK_
ELP3	Ubiquitylation	K42	0.650		_DIDLNKVK(gl)TK_
ELP3	Ubiquitylation	K77	0.857	-0.808	_LK(gl)AKPIR_
ELP3	Ubiquitylation	K333		0.344	_GTGLYELWK(gl)SGR_
ELP3	Ubiquitylation	K392		0.034	_MK(gl)DLGIQCR_
ELP4	Ubiquitylation	K406	0.254	-0.819	_MDLAESAK(gl)R_
ERCC6	Phosphorylation	S158	0.039	0.466	_IIEQLS(ph)PQAATSR_
ERCC6	Phosphorylation	S212		-0.295	_IELDHAS(ph)LEEDAEPGPSSLGSMLMPVQETAWEELIR_
ERCC6	Ubiquitylation	K255	0.184	-1.007	_TGQMTPFGTQIPQK(gl)QEK_
ERCC6	Ubiquitylation	K258	0.830	-1.007	_TGQMTPFGTQIPQKQEK(gl)_
ERCC6	Phosphorylation	T303		-1.105	_KAPAPVT(ph)PPAPVQNK_
ERCC6	Ubiquitylation	K345	0.454	-0.211	_ALQFQGK(gl)VGLPK_
ERCC6	Ubiquitylation	K606	0.305		_VAILHETGSYTHK(gl)K_
ERCC6	Ubiquitylation	K607	0.278		_VAILHETGSYTHKK(gl)_
ERCC6	Ubiquitylation	K663	-0.597	0.145	_NPNAAVTLACK(gl)QFR_
ERCC6	Ubiquitylation	K729	1.490	0.510	_TAYK(gl)CACVLR_
ERCC6	Ubiquitylation	K759		-0.019	_MSLSLPDK(gl)NEQVLFCR_
ERCC6	Ubiquitylation	K774	0.041	1.536	_LTDEQHK(gl)VYQNFVDSK_
ERCC6	Ubiquitylation	K783	0.262	-0.019	_VYQNFVDSK(gl)EVYR_
ERCC6	Ubiquitylation	K955	-0.048	-0.623	_K(gl)QVTVYR_
ERCC6	Phosphorylation	S1068	0.742	0.512	_KFPASNISVNDATS(ph)SEEKSEAK_
ERCC6	Phosphorylation	S1142	0.830	0.891	_TSMPS(ph)GDESIDEK_
ERCC6	Phosphorylation	S1146	1.367	0.961	_TSMPSGDES(ph)IDEK_
ERCC6	Ubiquitylation	K1156	0.818	-0.034	_LGLSYK(gl)R_
ERCC6	Ubiquitylation	K1295	0.149	0.443	_VAQDALK(gl)ALR_
ERCC6	Ubiquitylation	K1327	-0.793	0.156	_GISGAPAGK(gl)K_
ERCC6	Ubiquitylation	K1328	-0.793	0.232	_GISGAPAGKK(gl)_
ERCC6	Phosphorylation	S1345	0.486	0.469	_NSNFSVQHPS(ph)STSPTEK_
ERCC6	Phosphorylation	S1346	0.052	0.548	_NSNFSVQHPSS(ph)TSPTEK_
ERCC6	Phosphorylation	T1347	0.180	0.745	_NSNFSVQHPSST(ph)SPTEK_
ERCC6	Phosphorylation	S1348	0.238	0.374	_NSNFSVQHPSSTS(ph)PTEK_
ERCC6	Ubiquitylation	K1352	-1.415		_NSNFSVQHPSSTSPTEK(gl)CQDGIMK_
ERCC6	Ubiquitylation	K1359	0.923		_CQDGIMK(gl)K_
ERCC6	Ubiquitylation	K1360		2.898	_CQDGIMKK(gl)_
ERCC6	Ubiquitylation	K1363	-0.116	-0.707	_EGK(gl)DNVPEHFSGR_
ERCC6	Phosphorylation	S1379	0.589	0.418	_AEDADS(ph)SSGPLASSSLLAK_
ERCC6	Ubiquitylation	K1392	-0.822	-0.293	_AEDADSSSGPLASSSLLAK(gl)MR_
ERCC6	Ubiquitylation	K1457	0.602	1.210	_EILQEFESK(gl)LSASQSCVFR_
ERCC6	Ubiquitylation	K1487	-0.363	-0.266	_TSGGEGIWK(gl)LKPEYC_
IKBKAP	Ubiquitylation	K716		-1.287	_IVTVVPQDTK(gl)LVLQMPR_
TCEA2	Phosphorylation	T96	0.333	0.133	_KKEPAIT(ph)SQNSPEAR_
TCEA2	Phosphorylation	S97	0.484	0.281	_EPAITS(ph)QNSPEAR_
TCEA2	Phosphorylation	S100	0.006	0.054	_KKEPAITSQNS(ph)PEAR_
TCEA2	Ubiquitylation	K184	-0.058		_DVGNTDMK(gl)YK_
TCEA2	Ubiquitylation	K242	0.908		_NLTK(gl)EAIR_
TCEA2	Ubiquitylation	K265	0.854		_TGGTQTDLFTCGK(gl)CK_
TTF2	Ubiquitylation	K755		-0.600	_VQTSIAVCK(gl)LQACAR_
TTF2	Ubiquitylation	K871	-0.839		_SALQSYLK(gl)R_
TTF2	Phosphorylation	S880		-0.147	_GNQS(ph)GRSPNNPFSR_
TTF2	Phosphorylation	S883	0.016	-0.105	_GNQSGRS(ph)PNNPFSR_
TTF2	Ubiquitylation	K1109		-0.514	_VGQQK(gl)DVVIHR_