bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: ELP2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ELP2 0 0.128 0.130 -0.470 0.142

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ELP2 Ubiquitylation K524 0.072 -0.086 _FQFVSGADEK(gl)VLR_
ELP2 Ubiquitylation K484 -0.739 _LFAPWK(gl)R_

Background Information for ELP2:


Pubmed-ELP2 »
Uniprot-ELP2 »
Biogrid-ELP2 »
ProteomicsDB-ELP2 »

Tumorportal-ELP2 »
COSMIC-ELP2 »
GenomeRNAi-ELP2 »
Genecards-ELP2


Protein-protein Interactions for ELP2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ASAP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C15orf17 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KPTN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MPG Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ELP2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members WD40_repeat_dom IPR017986 1.39
Category members WD40_repeat IPR001680 0.52


Protein complexes (CORUM database) featuring ELP2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1380 Elongator holo complex Database 0
Category members Corum 2716 Elongator core complex Database 0


Categories featuring ELP2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006368 transcription elongation from RNA polymerase II promoter Database 2.03
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0016591 DNA-directed RNA polymerase II, holoenzyme Database 1.52
Category members GO Category GO:0019901 protein kinase binding Database 0.37
Category members GO Category GO:0006357 regulation of transcription from RNA polymerase II promoter Database 0.19
Category members GO Category GO:0046425 regulation of JAK-STAT cascade Database 0.08
Category members Pathway Pathway_719 ST_INTERFERON_GAMMA_PATHWAY 0 0
Category members Disease phenotype Autosomal_Recessive_Mental_Retardation Autosomal Recessive Mental Retardation Database 0
Category members GO Category GO:0008023 transcription elongation factor complex Database 0
Category members GO Category GO:0033588 Elongator holoenzyme complex Database 0


.

© Copyright Svejstrup Laboratory 2015