RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
SEC61A1	2	1.170	-1.120				0.304	0.263
SEC16A	1	0.930	-0.450				0.465	-0.688
HTT	1	-0.200	-0.360	0.632			0.847	0.550
LMAN1	0						0.562	0.393
LMAN1	0
DOPEY1	0	0.100	0.290
COL4A3BP	0	-0.460	0.000
BNIP1	0	-0.940	0.840				0.333	0.290
ATL2	0	1.320	-0.730	0.122			-1.518	-0.009
PEX5	0	-0.220	0.060	-0.723
DOPEY2	0	0.300	-0.270
JAGN1	0	-1.230	1.710				0.706	0.549
EIF2AK3	0	0.010	0.340
ATL3	0	0.330	0.030	1.194			0.678	1.040

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATL2	Phosphorylation	S24	0.308		_RRTS(ph)DPSAAVNHVSSTTSLGENYEDDDLVNSDEVM(ox)K_
ATL2	Phosphorylation	S27	0.452	0.451	_RRTSDPS(ph)AAVNHVSSTTSLGENYEDDDLVNSDEVM(ox)K_
ATL2	Ubiquitylation	K270		-0.836	_LQVK(gl)QNQHEELQNVR_
ATL2	Ubiquitylation	K346		0.278	_EISGSK(gl)VTCR_
ATL2	Ubiquitylation	K427	-0.252	0.249	_EVAIK(gl)QFR_
BNIP1	Ubiquitylation	K48	-0.830		_VK(gl)EKFQQLR_
BNIP1	Ubiquitylation	K178	0.158		_TILDANEEFK(gl)SMSGTIQLGR_
COL4A3BP	Phosphorylation	S377	-0.986	-1.717	_SSS(ph)MSSIDLVSASDDVHR_
DOPEY1	Ubiquitylation	K1999		-1.482	_NLEVK(gl)PSPK_
DOPEY2	Phosphorylation	S597	0.507	0.934	_SEDSGIGLSASS(ph)PELSEHLR_
EIF2AK3	Phosphorylation	S715		0.832	_EHIEIIAPS(ph)PQR_
HTT	Ubiquitylation	K260		-0.128	_AFIANLK(gl)_
HTT	Phosphorylation	S419	0.595	0.531	_SGS(ph)IVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S430	0.402	0.494	_SGSIVELIAGGGSS(ph)CSPVLSR_
HTT	Phosphorylation	S432	0.317	0.640	_SGSIVELIAGGGSSCS(ph)PVLSR_
HTT	Phosphorylation	S1195	-0.222	0.264	_EKEPGEQAS(ph)VPLSPK_
HTT	Phosphorylation	S1199	-0.456	-0.970	_GKEKEPGEQASVPLS(ph)PK_
HTT	Ubiquitylation	K1402	0.169	-0.538	_VSTQLK(gl)TNLTSVTK_
HTT	Phosphorylation	S1874	1.994	1.028	_LLSPQMS(ph)GEEEDSDLAAK_
LMAN1	Ubiquitylation	K96		0.601	_GSVWTK(gl)TK_
LMAN1	Ubiquitylation	K346	-0.443		_IHLEIK(gl)QLNR_
LMAN1	Ubiquitylation	K372	1.187	0.921	_YVSSLTEEISK(gl)R_
LMAN1	Ubiquitylation	K407		0.987	_QVNEMK(gl)NSMSETVR_
LMAN1	Ubiquitylation	K463		-0.810	_NMPSNEK(gl)PK_
LMAN1	Ubiquitylation	K465		-0.810	_NMPSNEK(gl)PK_
PEX5	Ubiquitylation	K238	-0.622		_LANSEFLK(gl)FVR_
SEC16A	Phosphorylation	S73		-0.792	_S(ph)SPPVLQGPAPAGFSQHPGLLVPHTHAR_
SEC16A	Phosphorylation	S74		-0.792	_S(ph)SPPVLQGPAPAGFSQHPGLLVPHTHAR_
SEC16A	Phosphorylation	S122		1.124	_AHAS(ph)PFSGALTPSAPPGPEMNR_
SEC16A	Phosphorylation	S568	0.516	0.641	_QIDS(ph)SPVGGETDETTVSQNYR_
SEC16A	Phosphorylation	S569	0.516	0.566	_QIDSS(ph)PVGGETDETTVSQNYR_
SEC16A	Phosphorylation	S957	-0.494	-0.870	_AGSALPGFANS(ph)PAGSTSVVLVPPAHGTLVPDGNK_
SEC16A	Phosphorylation	S1069	-0.875	-1.477	_AQQELVPPQQQAS(ph)PPQLPK_
SEC16A	Ubiquitylation	K1313	-0.030		_EHSAFGDRPEK(gl)R_
SEC16A	Phosphorylation	T1325	-0.701	-0.174	_FT(ph)GSFDDDPDPHRDPYGEEVDRR_
SEC16A	Phosphorylation	S1327	-0.966	-0.298	_FTGS(ph)FDDDPDPHRDPYGEEVDRR_
SEC16A	Phosphorylation	S1398		-0.421	_SHNVAAGSYEAPLPPGS(ph)FHGDFAYGTYR_
SEC16A	Phosphorylation	T1440	-1.033		_SNFSSGPGFPEYGYPADTVWPAMEQVSSRPT(ph)SPEK_
SEC16A	Phosphorylation	S1441	-0.463	-1.382	_SNFSSGPGFPEYGYPADTVWPAMEQVSSRPTS(ph)PEK_
SEC16A	Phosphorylation	S1964	-1.818	-1.442	_LLPSAPQTLPDGPLAS(ph)PAR_
SEC16A	Phosphorylation	S2022		-1.272	_S(ph)PDPGIVPQEAPVGNSLSELSEENFDGK_
SEC16A	Phosphorylation	T2054	-0.035	0.271	_FANLT(ph)PSR_
SEC16A	Phosphorylation	S2083	-0.428		_ADSGPTQPPLSLS(ph)PAPETK_
SEC16A	Phosphorylation	S2252	1.901	1.257	_NDGLLALS(ph)SPDAEEPQLPDGTGR_
SEC16A	Phosphorylation	S2253	2.097	1.217	_NDGLLALSS(ph)PDAEEPQLPDGTGR_
SEC61A1	Ubiquitylation	K113		-0.118	_IIEVGDTPK(gl)DR_
SEC61A1	Ubiquitylation	K394		1.586	_TWIEVSGSSAK(gl)DVAK_
SEC61A1	Ubiquitylation	K398		0.253	_DVAK(gl)QLK_
SEC61A1	Ubiquitylation	K401	-1.030	0.553	_QLK(gl)EQQMVMR_
SEC61A1	Phosphorylation	S414		0.827	_ETS(ph)MVHELNR_