RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
TRAF3IP2	0	1.490	-1.010
MEF2A	0	0.820	-0.530
MEF2A	0	0.820	-0.530
MEF2C	0	-0.980	1.550
MEF2C	0	-0.980	1.550
GPI	0	0.140	-0.230	-0.881			0.978	0.914
GPI	0	0.140	-0.230
GATA3	0	0.000	-0.660
TFEB	0	0.270	0.450
MNX1	0	-1.070	1.390
RBPJ	0	1.900	-0.160	-0.367	0.284	0.723	-0.090	0.134
BCL2	0	0.910	-0.740
YTHDF1	0	-0.360	1.030	-0.003	0.002	0.335	-0.676	-0.053

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
GATA3	Phosphorylation	S162	-1.195	-0.563	_DVS(ph)PDPSLSTPGSAGSAR_
GPI	Ubiquitylation	K12	0.115	0.544	_DPQFQK(gl)LQQWYR_
GPI	Ubiquitylation	K73	0.646	1.187	_MLVDLAK(gl)SR_
GPI	Ubiquitylation	K89	-0.366	1.232	_MFNGEK(gl)INYTEGR_
GPI	Phosphorylation	S107	-0.341	0.159	_S(ph)NTPILVDGKDVM(ox)PEVNK_
GPI	Phosphorylation	T109	0.024	-0.027	_SNT(ph)PILVDGK_
GPI	Ubiquitylation	K116	0.504		_SNTPILVDGK(gl)DVMPEVNK_
GPI	Ubiquitylation	K130	0.931	1.163	_MK(gl)SFCQR_
GPI	Ubiquitylation	K142	0.922	1.123	_SGDWK(gl)GYTGK_
GPI	Ubiquitylation	K234	-0.228	0.467	_EWFLQAAK(gl)DPSAVAK_
GPI	Ubiquitylation	K241	0.187	0.264	_DPSAVAK(gl)HFVALSTNTTK_
GPI	Ubiquitylation	K362		0.882	_FAAYFQQGDMESNGK(gl)YITK_
GPI	Ubiquitylation	K366	0.484	0.754	_YITK(gl)SGTR_
GPI	Ubiquitylation	K447	0.643	0.199	_STEEARK(gl)ELQAAGK_
GPI	Ubiquitylation	K454	-0.613	-0.505	_ELQAAGK(gl)SPEDLER_
MEF2A	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2A	Phosphorylation	S235	0.664	-0.092	_AS(ph)PNLIGATGANSLGK_
MEF2A	Phosphorylation	T253		-1.271	_VMPT(ph)KSPPPPGGGNLGMNSR_
MEF2A	Phosphorylation	S255		-1.235	_VMPTKS(ph)PPPPGGGNLGMNSR_
MEF2A	Phosphorylation	S408	-0.173	-0.049	_SEPIS(ph)PPRDR_
MEF2A	Phosphorylation	S494	-0.858	-1.232	_GDFHSPIVLGRPPNTEDRES(ph)PSVK_
MEF2C	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2C	Phosphorylation	S240	0.008	0.302	_NS(ph)PGLLVSPGNLNK_
MEF2C	Phosphorylation	S406	0.272	0.338	_SEPVS(ph)PPRDR_
MNX1	Phosphorylation	S77	1.417		_LRAES(ph)PSPPR_
MNX1	Ubiquitylation	K240	-0.232	-0.808	_MPDFNSQAQSNLLGK(gl)CR_
TFEB	Phosphorylation	S541		-0.724	_KDLDLMLLDDSLLPLASDPLLSTMS(ph)PEASK_
TFEB	Phosphorylation	S555	0.499	0.811	_RSSFS(ph)MEEGDVL_
TRAF3IP2	Phosphorylation	T402	0.746		_T(ph)SNLPEELR_
YTHDF1	Phosphorylation	S2	-0.459	-0.043	_(ac)S(ph)ASSLLEQRPK_
YTHDF1	Ubiquitylation	K12	-0.662	-0.236	_(ac)SASSLLEQRPK(gl)GQGNK_
YTHDF1	Phosphorylation	S39	-0.596	-0.254	_DGLNDDDFEPYLS(ph)PQAR_