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Query: YTHDF1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
YTHDF1 0 -0.344 -0.360 1.030 0.082 -0.633
YTHDF1 0 -0.344 -0.360 1.030 -0.003 0.002 0.335 -0.676 -0.053

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
YTHDF1 Phosphorylation S2 -0.459 -0.043 _(ac)S(ph)ASSLLEQRPK_
YTHDF1 Ubiquitylation K12 -0.662 -0.236 _(ac)SASSLLEQRPK(gl)GQGNK_
YTHDF1 Phosphorylation S39 -0.596 -0.254 _DGLNDDDFEPYLS(ph)PQAR_

Background Information for YTHDF1:





Protein-protein Interactions for YTHDF1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait ACOX3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCL22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDIPT Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CTSG Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DNAJC11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DNASE2B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EMID1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FADS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM136A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNJ10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KIAA1683 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LPPR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MFGE8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC25A11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ST8SIA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SYNCRIP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM184B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait YTHDF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait YTHDF3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in YTHDF1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members YTH_domain IPR007275 0.08


Protein complexes (CORUM database) featuring YTHDF1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring YTHDF1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF


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