RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ZFYVE16	1	-1.080	1.970
RAB7A	1	1.540	-0.590	0.299	1.971	-0.775	0.288	-0.293
AP3B1	1			0.283			0.568	0.447
AP3M1	1	2.120	-1.010	-0.529			-0.213	-0.553
NEDD4	0	-1.320	1.730
GCC2	0	-0.080	-0.090
GCC2	0	-0.080	-0.090				-0.166	-0.559
SCARB2	0	0.220	0.470				0.565	0.756

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AP3B1	Ubiquitylation	K74		3.486	_IVGM(ox)IAKGK(gl)_
AP3B1	Phosphorylation	S276	0.667	0.762	_NFYES(ph)DDDQKEK_
AP3M1	Ubiquitylation	K283	-0.147		_HSISFK(gl)ENSSCGR_
AP3M1	Ubiquitylation	K413	-0.636	-0.807	_AGK(gl)FQVR_
GCC2	Ubiquitylation	K32	-0.102	0.582	_EDLIK(gl)FAK_
GCC2	Ubiquitylation	K1492	-1.241		_SPVSSQQSLK(gl)NLR_
NEDD4	Phosphorylation	Y751		-0.924	_RGSLQAY(ph)TFEEQPTLPVLLPTSSGLPPGWEEK_
NEDD4	Ubiquitylation	K874	0.127		_LK(gl)IPAHLR_
NEDD4	Ubiquitylation	K882	-0.919	0.114	_GK(gl)TSLDTSNDLGPLPPGWEER_
RAB7A	Ubiquitylation	K32	0.922	1.260	_K(gl)FSNQYK_
RAB7A	Ubiquitylation	K38	0.713	1.294	_FSNQYK(gl)ATIGADFLTK_
RAB7A	Ubiquitylation	K146		-0.718	_AQAWCYSK(gl)NNIPYFETSAK_
ZFYVE16	Ubiquitylation	K86	-0.638		_TLK(gl)GLTSIQNEK_
ZFYVE16	Ubiquitylation	K455	-1.793		_K(gl)IDPDQTVIR_
ZFYVE16	Phosphorylation	S939	1.491	1.197	_NEIIQS(ph)PISQVPSVEK_
ZFYVE16	Ubiquitylation	K1202	-2.966	3.670	_LGAEYK(gl)AYPAPLTSIR_
ZFYVE16	Ubiquitylation	K1257	0.166	0.179	_SCIK(gl)IPR_
ZFYVE16	Ubiquitylation	K1364	-0.812		_LALREQK(gl)DFK_
ZFYVE16	Ubiquitylation	K1367	-1.498		_DFK(gl)ITCGK_
ZFYVE16	Ubiquitylation	K1372		0.291	_ITCGK(gl)VDAVDLR_