RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
HSP90AB1	1	1.280	-1.050	0.283	0.786	-1.175	0.317	0.463
PBRM1	1	1.130	-0.860	0.203	-0.319	0.305	0.606	0.462
MAP3K4	0	0.000	0.450
RTCB	0	-0.340	-0.280	-0.127	-0.216	0.247	0.093	0.212
MET	0	-0.010	-0.330
BIRC2	0	-0.730	0.440
BIRC2	0	-0.730	0.440
SOD1	0	1.450	-1.250
CCNF	0	0.710	-0.520
E2F7	0	0.000	0.720		-2.763	-0.494
PLAC1	0	-0.710	1.690
ADA	0	0.340	-0.830
TXNRD1	0	-0.400	-0.200
PEG10	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADA	Ubiquitylation	K312		0.123	_STLDTDYQMTK(gl)R_
BIRC2	Ubiquitylation	K15	-0.259	0.307	_(ac)MEDSTILSDWTNSNK(gl)QK_
BIRC2	Ubiquitylation	K17	-0.259	0.307	_(ac)MEDSTILSDWTNSNK(gl)QK_
BIRC2	Ubiquitylation	K38	-0.069		_SIMEDSTILSDWTNSNKQK(gl)_
BIRC2	Ubiquitylation	K102		-1.755	_LGDSPIQK(gl)HK_
BIRC2	Ubiquitylation	K233	-0.511		_LSNWEPK(gl)DDAMSEHR_
BIRC2	Ubiquitylation	K410		0.878	_DLVK(gl)QTVQSK_
BIRC2	Ubiquitylation	K490	0.305	0.534	_ANVINK(gl)QEHDIIK_
BIRC2	Ubiquitylation	K497	-1.934		_ANVINKQEHDIIK(gl)QK_
CCNF	Ubiquitylation	K514		0.681	_QVSLTAVK(gl)QR_
E2F7	Phosphorylation	S410	0.286	0.865	_HGS(ph)FNTVQASER_
HSP90AB1	Ubiquitylation	K64	0.829	-0.090	_YESLTDPSK(gl)LDSGKELK_
HSP90AB1	Ubiquitylation	K69	0.661	0.380	_LDSGK(gl)ELK_
HSP90AB1	Ubiquitylation	K72	-1.242	-0.130	_ELK(gl)IDIIPNPQER_
HSP90AB1	Phosphorylation	S226	0.404	0.704	_EKEIS(ph)DDEAEEEK_
HSP90AB1	Phosphorylation	S255	0.525	0.628	_IEDVGS(ph)DEEDDSGKDKK_
HSP90AB1	Phosphorylation	S261	0.520	0.624	_IEDVGSDEEDDS(ph)GKDK_
HSP90AB1	Ubiquitylation	K347	0.110		_RAPFDLFENK(gl)K_
HSP90AB1	Ubiquitylation	K348	-0.096		_RAPFDLFENKK(gl)_
HSP90AB1	Ubiquitylation	K428	0.308		_K(gl)FYEAFSK_
HSP90AB1	Ubiquitylation	K435	0.847	0.933	_FYEAFSK(gl)NLK_
HSP90AB1	Ubiquitylation	K438	1.021	-0.058	_NLK(gl)LGIHEDSTNR_
HSP90AB1	Ubiquitylation	K481	0.811		_MKETQK(gl)SIYYITGESK_
HSP90AB1	Ubiquitylation	K491	0.982	1.512	_SIYYITGESK(gl)EQVANSAFVER_
HSP90AB1	Ubiquitylation	K531	0.745	1.350	_EFDGK(gl)SLVSVTK_
HSP90AB1	Ubiquitylation	K559	0.847	1.549	_AK(gl)FENLCK_
HSP90AB1	Ubiquitylation	K565	-0.066		_FENLCK(gl)LMK_
HSP90AB1	Ubiquitylation	K573	0.243	0.360	_EILDK(gl)KVEK_
HSP90AB1	Ubiquitylation	K574	0.241	0.550	_EILDKK(gl)VEK_
HSP90AB1	Ubiquitylation	K623	0.520	1.081	_DNSTMGYM(ox)MAK(gl)K_
MAP3K4	Ubiquitylation	K406		0.367	_DLNQK(gl)LR_
MAP3K4	Phosphorylation	S1252		-0.654	_HSS(ph)PTEERDEPAYPR_
MET	Ubiquitylation	K962	0.146		_QIK(gl)DLGSELVR_
MET	Phosphorylation	S988	0.064		_S(ph)VSPTTEM(ox)VSNESVDYR_
MET	Phosphorylation	S990	0.192	-0.105	_SVS(ph)PTTEM(ox)VSNESVDYR_
MET	Phosphorylation	T992	0.501	-0.048	_SVSPT(ph)TEMVSNESVDYR_
MET	Phosphorylation	S997		0.285	_S(ph)VSPTTEMVS(ph)NESVDYR_
PBRM1	Phosphorylation	T9	-0.114		_AT(ph)SPSSSVSGDFDDGHHSVSTPGPSR_
PBRM1	Phosphorylation	S10	-0.217	-0.034	_ATS(ph)PSSSVSGDFDDGHHSVSTPGPSR_
PBRM1	Phosphorylation	S14	0.006		_ATSPSSS(ph)VSGDFDDGHHSVSTPGPSR_
PBRM1	Phosphorylation	S39	1.987	0.805	_RLS(ph)NLPTVDPIAVCHELYNTIR_
PBRM1	Phosphorylation	S177	0.200		_GEADDEDDDEDGQDNQGTVTEGS(ph)SPAYLK_
PBRM1	Phosphorylation	S178	0.199	0.037	_GEADDEDDDEDGQDNQGTVTEGSS(ph)PAYLK_
PBRM1	Phosphorylation	S636		-1.172	_ELGPLPDDDDM(ox)AS(ph)PK_
PBRM1	Ubiquitylation	K1019	-0.114		_EVFK(gl)SDYYNKVPVSK_
PBRM1	Ubiquitylation	K1293	-1.845		_K(gl)PIVPQKEPSPLLEK_
PBRM1	Ubiquitylation	K1398	-0.220		_AVIK(gl)AQHPDYSFGELSR_
PBRM1	Ubiquitylation	K1642	0.436	-0.821	_DVHLSK(gl)EQESR_
PEG10	Ubiquitylation	K22	-0.861	-0.710	_VMK(gl)QSEENNNLQSQVQK_
PEG10	Ubiquitylation	K36	-1.757		_QSEENNNLQSQVQK(gl)LTEENTTLR_
PEG10	Ubiquitylation	K136	-0.504	-0.228	_WASAK(gl)LER_
PEG10	Ubiquitylation	K567	-1.225	-0.448	_NVK(gl)DGLITPTIAPNGAQVLQVK(gl)R_
PEG10	Ubiquitylation	K586	-2.378	-0.968	_NVK(gl)DGLITPTIAPNGAQVLQVK(gl)R_
PLAC1	Ubiquitylation	K108		-0.160	_GTPSK(gl)FVIPVSCAAPQK_
PLAC1	Ubiquitylation	K126		-0.149	_SPWLTK(gl)PCSMR_
RTCB	Ubiquitylation	K206		-0.057	_MLQADPNK(gl)VSAR_
RTCB	Ubiquitylation	K366	0.974	0.041	_VEQHVVDGK(gl)ER_
RTCB	Ubiquitylation	K493	0.471	0.657	_NVTDVVNTCHDAGISKK(gl)_
SOD1	Ubiquitylation	K4	-0.329		_(ac)ATK(gl)AVCVLK_
SOD1	Ubiquitylation	K10	0.211	0.582	_AVCVLK(gl)GDGPVQGIINFEQK_
SOD1	Ubiquitylation	K24	-0.435	-0.086	_GDGPVQGIINFEQK(gl)ESNGPVK_
SOD1	Ubiquitylation	K31	-0.109	0.332	_ESNGPVK(gl)VWGSIK_
SOD1	Phosphorylation	S99		0.405	_HVGDLGNVTADKDGVADVS(ph)IEDSVISLSGDHCIIGR_
SOD1	Ubiquitylation	K123	0.352	0.004	_TLVVHEK(gl)ADDLGK_
SOD1	Ubiquitylation	K129	0.143		_ADDLGK(gl)GGNEESTK_
SOD1	Ubiquitylation	K137	0.464	0.934	_ADDLGKGGNEESTK(gl)TGNAGSR_
TXNRD1	Ubiquitylation	K580	-0.043	-0.178	_IICNTK(gl)DNER_