Results for the Category
neural tube formation
(GO:0001841)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| CASP8 | 1 | 1.120 | -1.090 | |||||
| STK4 | 0 | 0.260 | -0.240 | |||||
| STK4 | 0 | 0.260 | -0.240 | |||||
| STK4 | 0 | 0.260 | -0.240 | -0.235 | -0.851 | |||
| MIB1 | 0 | 0.710 | -1.060 | 0.258 | ||||
| STK3 | 0 | -0.570 | 0.720 | |||||
| STK3 | 0 | -0.570 | 0.720 | -0.235 | -0.851 | |||
| SOX4 | 0 | 1.610 | -0.930 | |||||
| MAP3K7 | 0 | -1.120 | 1.140 | -1.048 | ||||
| IFT172 | 0 | 0.030 | -0.130 | |||||
| IPMK | 0 | 1.180 | -0.980 | -0.507 | -0.426 | |||
| PTCH1 | 0 | 0.630 | -0.690 | |||||
| TCTN1 | 0 | 1.100 | -1.080 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| CASP8 | Ubiquitylation | K183 | 1.917 | _IINDYEEFSK(gl)ER_ | |
| CASP8 | Ubiquitylation | K461 | -2.031 | _NMGK(gl)QMPQPTFTLR_ | |
| IFT172 | Ubiquitylation | K656 | 0.295 | _CFSALGQVAK(gl)AR_ | |
| IFT172 | Ubiquitylation | K696 | -0.461 | _LAMLEKNYK(gl)_ | |
| IFT172 | Ubiquitylation | K781 | -0.224 | _AGLPAK(gl)AAR_ | |
| MAP3K7 | Phosphorylation | S374 | 0.149 | -0.337 | _GS(ph)SVESLPPTSEGK_ |
| MAP3K7 | Phosphorylation | S375 | 0.171 | -0.087 | _GSS(ph)VESLPPTSEGK_ |
| MAP3K7 | Phosphorylation | S389 | 1.072 | 1.445 | _RMS(ph)ADMSEIEAR_ |
| MAP3K7 | Phosphorylation | S439 | 0.246 | 0.198 | _S(ph)IQDLTVTGTEPGQVSSR_ |
| MAP3K7 | Ubiquitylation | K474 | -0.385 | -0.242 | _MITTSGPTSEK(gl)PTR_ |
| MAP3K7 | Ubiquitylation | K589 | -0.104 | _SLSTYYQQCK(gl)K_ | |
| MAP3K7 | Ubiquitylation | K590 | -0.551 | 0.560 | _K(gl)QLEVIR_ |
| MIB1 | Ubiquitylation | K28 | -0.465 | -1.379 | _WGK(gl)QDGGEGHVGTVR_ |
| MIB1 | Ubiquitylation | K222 | -0.025 | -0.938 | _CVQDAK(gl)GGSFYR_ |
| MIB1 | Ubiquitylation | K420 | -1.942 | -2.115 | _LSQLLK(gl)K_ |
| MIB1 | Ubiquitylation | K421 | -1.850 | _LSQLLKK(gl)_ | |
| MIB1 | Ubiquitylation | K485 | -1.697 | _LLLK(gl)QNVDVEAEDKDGDR_ | |
| MIB1 | Ubiquitylation | K726 | -2.735 | -2.946 | _QLQDMQDVGK(gl)VDAAWEPSK_ |
| MIB1 | Ubiquitylation | K749 | -2.124 | _NTLIMGLGTQGAEK(gl)K_ | |
| MIB1 | Ubiquitylation | K750 | -2.385 | -2.133 | _NTLIMGLGTQGAEKK(gl)_ |
| MIB1 | Ubiquitylation | K787 | -3.370 | _KGQSPLDLCPDPNLCK(gl)ALAK_ | |
| MIB1 | Ubiquitylation | K791 | -3.063 | -2.513 | _GQSPLDLCPDPNLCKALAK(gl)_ |
| MIB1 | Ubiquitylation | K796 | -3.011 | _EK(gl)VSGQVGSR_ | |
| MIB1 | Ubiquitylation | K854 | -0.986 | _CLICK(gl)EQVQSR_ | |
| MIB1 | Ubiquitylation | K872 | -2.513 | -2.977 | _TKIEECVVCSDK(gl)K_ |
| MIB1 | Ubiquitylation | K873 | -2.513 | _IEECVVCSDK(gl)K_ | |
| PTCH1 | Ubiquitylation | K904 | -0.390 | _DKPIDISQLTK(gl)QR_ | |
| SOX4 | Phosphorylation | S354 | -0.003 | _SSAASSPAAGRS(ph)PADHR_ | |
| STK3 | Ubiquitylation | K176 | -0.350 | _DIK(gl)AGNILLNTEGHAK_ | |
| STK3 | Ubiquitylation | K205 | -0.223 | -0.386 | _LADFGVAGQLTDTMAK(gl)R_ |
| STK3 | Phosphorylation | S344 | 0.416 | 0.115 | _ELEEEEENS(ph)DEDELDSHTM(ox)VK_ |
| STK3 | Phosphorylation | S344 | 0.573 | 0.366 | _EMDQDDEENS(ph)EEDEMDSGTMVR_ |
| STK3 | Phosphorylation | S413 | 0.603 | 1.205 | _NATS(ph)PQVQRPSFMDYFDK_ |
| STK3 | Ubiquitylation | K481 | -0.782 | _LK(gl)ALDPMMER_ | |
| STK4 | Ubiquitylation | K176 | -0.350 | _DIK(gl)AGNILLNTEGHAK_ | |
| STK4 | Ubiquitylation | K205 | -0.223 | -0.386 | _LADFGVAGQLTDTMAK(gl)R_ |
| STK4 | Phosphorylation | S320 | 0.555 | 0.552 | _EVDQDDEENS(ph)EEDEMDSGTM(ox)VR_ |
| STK4 | Phosphorylation | S344 | 0.573 | 0.366 | _EMDQDDEENS(ph)EEDEMDSGTMVR_ |
| TCTN1 | Ubiquitylation | K459 | 1.010 | _LTGALPCQLVAQKVK(gl)_ |
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