bioLOGIC Category
Results for the Category
RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
(GO:0001228)
| RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
| W |
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| Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
|
CSRNP2
|
0
|
-0.760
|
0.460
|
|
|
|
|
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|
SRF
|
0
|
0.670
|
-1.020
|
|
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LEF1
|
0
|
-0.710
|
0.790
|
-0.741
|
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TP53
|
0
|
-1.070
|
1.050
|
-2.808
|
0.076
|
-0.094
|
0.436
|
0.497
|
|
GABPA
|
0
|
-0.400
|
0.630
|
|
|
|
|
|
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GABPA
|
0
|
-0.350
|
1.120
|
|
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MSX1
|
0
|
0.420
|
-0.450
|
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RBPJ
|
0
|
1.900
|
-0.160
|
-0.367
|
0.284
|
0.723
|
-0.090
|
0.134
|
| Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
|
CSRNP2
|
Phosphorylation
|
Y269
|
|
-3.040
|
_THY(ph)LHTIM(ox)KLELES(ph)K_
|
|
CSRNP2
|
Phosphorylation
|
S280
|
|
-3.040
|
_THY(ph)LHTIM(ox)KLELES(ph)K_
|
|
GABPA
|
Ubiquitylation
|
K359
|
-0.544
|
0.135
|
_LNQPELVAQK(gl)WGQR_
|
|
LEF1
|
Ubiquitylation
|
K88
|
-0.867
|
-0.222
|
_ESLEEAAK(gl)R_
|
|
MSX1
|
Phosphorylation
|
S154
|
|
0.148
|
_RLS(ph)PPACTLR_
|
|
SRF
|
Phosphorylation
|
S224
|
-0.512
|
-0.458
|
_ALIQTCLNSPDS(ph)PPR_
|
|
TP53
|
Ubiquitylation
|
K120
|
-0.188
|
|
_LGFLHSGTAK(gl)SVTCTYSPALNK_
|
|
TP53
|
Ubiquitylation
|
K164
|
0.157
|
-1.260
|
_AMAIYK(gl)QSQHMTEVVR_
|
|
TP53
|
Phosphorylation
|
S314
|
-0.695
|
-1.000
|
_ALPNNTSS(ph)SPQPK_
|
|
TP53
|
Phosphorylation
|
S315
|
-0.762
|
-0.959
|
_RALPNNTSSS(ph)PQPK_
|
|
TP53
|
Ubiquitylation
|
K320
|
-0.978
|
|
_ALPNNTSSSPQPKK(gl)_
|
|
TP53
|
Ubiquitylation
|
K357
|
-0.231
|
-0.823
|
_ELNEALELKDAQAGK(gl)EPGGSR_
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© Copyright Svejstrup Laboratory 2015