RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
UVSSA	2				3.509	3.693
PAF1	1	0.390	-0.320	1.232	0.546	1.561	-0.837	0.458
C14orf166	1	3.240	-1.010	-0.192	-0.333	0.294	-0.362	-0.198
WAC	1	1.080	-0.710				-2.718	0.290
RPRD1B	1	-0.280	0.460	0.234	1.123	2.253	-0.005	0.487
RPRD1B	1	-0.280	0.460	0.178	1.395	2.538	-0.102	0.850
RECQL5	1	-0.670	1.270	3.649	0.084	1.224
CDC73	1	1.000	-0.660	1.109	0.620	1.610	-0.862	0.436
CCAR2	1	0.450	-0.180	0.002	-1.630	-0.567	-1.352	-0.438
ZNF326	0	0.190	0.320	0.489	-0.177	0.137	0.286	0.135

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
C14orf166	Ubiquitylation	K108	-0.336	-0.565	_YKDLVPDNSK(gl)TADNATK_
C14orf166	Ubiquitylation	K171	-0.164		_LTQDAVAK(gl)ANQTK_
C14orf166	Ubiquitylation	K176	-0.152		_ANQTK(gl)EGLPVALDK_
CCAR2	Ubiquitylation	K93	-0.655		_GRLPQLGEK(gl)VLVK_
CCAR2	Phosphorylation	S124		-1.511	_VQTLSNQPLLKS(ph)PAPPLLHVAALGQK_
CCAR2	Ubiquitylation	K216	-1.250		_AGGEPWGAKK(gl)PR_
CCAR2	Ubiquitylation	K344	-0.298	-0.796	_ETPEHPLK(gl)QIK_
CCAR2	Ubiquitylation	K347	0.238	-1.500	_QIK(gl)FLLGR_
CCAR2	Phosphorylation	T454		1.476	_AAEAAPPT(ph)QEAQGETEPTEQAPDALEQAADTSR_
CCAR2	Phosphorylation	T484	-0.659		_RNAET(ph)PEATTQQETDTDLPEAPPPPLEPAVIAR_
CCAR2	Phosphorylation	S640		0.320	_GEAS(ph)EDLCEMALDPELLLLRDDGEEEFAGAK_
CCAR2	Phosphorylation	S675	-0.405	0.305	_S(ph)VASNQSEM(ox)EFSSLQDMPK_
CCAR2	Phosphorylation	S678	-0.005	0.398	_SVAS(ph)NQSEMEFSSLQDMPK_
CCAR2	Ubiquitylation	K742	1.561		_LSAEQAK(gl)QLVSR_
CDC73	Ubiquitylation	K136	0.034		_AADEVLAEAK(gl)KPR_
CDC73	Ubiquitylation	K161	1.275		_LEGHK(gl)EGIVQTEQIR_
CDC73	Ubiquitylation	K198	0.681		_STIK(gl)TDLDDDITALK_
CDC73	Ubiquitylation	K209	-0.003	-1.671	_TDLDDDITALK(gl)QR_
CDC73	Ubiquitylation	K243	0.937		_TTILQSTGK(gl)NFSK_
CDC73	Ubiquitylation	K247	0.739		_TTILQSTGKNFSK(gl)_
CDC73	Ubiquitylation	K283	-0.189		_TK(gl)QPIPAAYNR_
PAF1	Ubiquitylation	K62	-0.086	-0.282	_FVQYK(gl)ATSLEK_
PAF1	Ubiquitylation	K119		-1.018	_LLEEEIQAPTSSK(gl)R_
PAF1	Ubiquitylation	K133		0.847	_K(gl)TEYISTEFNR_
PAF1	Ubiquitylation	K188		-1.529	_TFEDAQK(gl)SISQHYSKPR_
PAF1	Ubiquitylation	K196	-1.455	-1.126	_SISQHYSK(gl)PR_
PAF1	Ubiquitylation	K300	-1.882	-0.738	_EYNWNVK(gl)NK_
PAF1	Ubiquitylation	K338	0.621	-0.090	_AK(gl)AGVQSGTNALLVVK_
PAF1	Ubiquitylation	K352	-0.333	-0.469	_AGVQSGTNALLVVK(gl)HR_
RECQL5	Phosphorylation	S727	-0.587	-0.527	_GEVPGGSAHYGGPS(ph)PEKK_
RECQL5	Phosphorylation	S815	-0.400	-0.271	_YTGEEDGAGGHS(ph)PAPPQTEECLR_
RECQL5	Phosphorylation	T839	0.366	0.040	_DQGT(ph)PEVQPTPAK_
RPRD1B	Ubiquitylation	K11	0.621		_(ac)SSFSESALEK(gl)K_
RPRD1B	Ubiquitylation	K12		0.419	_(ac)SSFSESALEKK(gl)_
RPRD1B	Phosphorylation	S132	-0.334		_LSM(ox)EDS(ph)KSPPPK_
RPRD1B	Phosphorylation	S134	-0.203	0.030	_LSMEDSKS(ph)PPPK_
RPRD1B	Phosphorylation	S156	-0.063	-0.120	_VDENENCSSLGS(ph)PSEPPQTLDLVR_
RPRD1B	Phosphorylation	S158	-0.243	-0.235	_VDENENCSSLGSPS(ph)EPPQTLDLVR_
RPRD1B	Ubiquitylation	K272	-0.212	-0.554	_DVLSEK(gl)EK_
RPRD1B	Ubiquitylation	K274	-0.212	-0.554	_DVLSEK(gl)EK_
WAC	Phosphorylation	S53	0.433	0.072	_MRDAGDPS(ph)PPNK_
WAC	Phosphorylation	S64	0.472	0.441	_SDS(ph)PENKYSDSTGHSK_
WAC	Phosphorylation	T293	2.401	1.442	_LPT(ph)PTSSVPAQK_
WAC	Phosphorylation	S511	1.112	0.116	_QQGHEPVS(ph)PR_
ZNF326	Phosphorylation	S268	0.473		_ISLS(ph)KSPTKTDPK_
ZNF326	Phosphorylation	S270	0.590	0.622	_ISLSKS(ph)PTK_
ZNF326	Phosphorylation	T272		0.261	_ISLSKSPT(ph)KTDPK_
ZNF326	Ubiquitylation	K459	-0.201		_ESVLTATSILNNPIVK(gl)AR_