Results for the Category
DNA synthesis involved in DNA repair
(GO:0000731)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| WRNIP1 | 1 | 1.010 | -0.780 | -0.010 | 0.550 | 1.699 | ||
| POLD1 | 0 | 1.600 | -1.300 | -0.932 | 0.362 | 0.283 | ||
| POLD1 | 0 | 1.600 | -1.300 | |||||
| POLD3 | 0 | -0.343 | ||||||
| SIRT1 | 0 | 0.910 | -0.910 | |||||
| RFC3 | 0 | 0.010 | -0.490 | 0.265 | -0.461 | 0.387 | 0.658 | 0.371 |
| WRN | 0 | -0.320 | -0.170 | 0.180 | ||||
| POLH | 0 | |||||||
| POLE | 0 | -0.404 | 0.128 | -0.376 | -0.212 | |||
| POLE | 0 | -0.273 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| POLD1 | Ubiquitylation | K414 | -1.315 | _AQTLK(gl)VQTFPFLGR_ | |
| POLD1 | Ubiquitylation | K439 | -1.108 | _DSSFQSK(gl)QTGRR_ | |
| POLD1 | Ubiquitylation | K447 | -1.286 | _DTK(gl)VVSMVGR_ | |
| POLD1 | Ubiquitylation | K554 | -0.798 | _GQQVK(gl)VVSQLLR_ | |
| POLD1 | Ubiquitylation | K674 | -1.082 | -1.843 | _TPTGDEFVK(gl)TSVR_ |
| POLD1 | Ubiquitylation | K758 | -0.638 | _TK(gl)QLVESK_ | |
| POLD1 | Ubiquitylation | K853 | -0.080 | -1.776 | _MDCK(gl)GLEAVR_ |
| POLD1 | Ubiquitylation | K911 | -0.089 | -0.915 | _IDISQLVITK(gl)ELTR_ |
| POLD1 | Ubiquitylation | K923 | -2.496 | _AASDYAGK(gl)QAHVELAER_ | |
| POLD1 | Ubiquitylation | K1033 | 0.475 | -0.930 | _VGGLLAFAK(gl)R_ |
| POLD1 | Ubiquitylation | K1065 | -0.208 | _ESELYQK(gl)EVSHLNALEER_ | |
| POLD3 | Phosphorylation | S307 | 0.831 | 0.828 | _VALS(ph)DDETKETENMR_ |
| POLE | Ubiquitylation | K187 | -0.801 | _EISPAVKK(gl)_ | |
| POLE | Ubiquitylation | K436 | -0.163 | _DSYLPVGSHNLK(gl)AAAK_ | |
| POLE | Ubiquitylation | K1061 | -1.582 | _KLEDYGEQK(gl)STSISTAK_ | |
| POLE | Ubiquitylation | K1081 | -1.440 | _LAEFLGDQMVK(gl)DAGLSCR_ | |
| POLE | Ubiquitylation | K1385 | -1.054 | -0.957 | _VAK(gl)AEEGASYR_ |
| POLE | Ubiquitylation | K1573 | -0.910 | _AETDLK(gl)TICR_ | |
| POLE | Ubiquitylation | K1587 | -0.722 | _FLLAYK(gl)EER_ | |
| POLE | Ubiquitylation | K2121 | 0.432 | _YVCK(gl)VLSLDTNITNQVNK_ | |
| POLE | Ubiquitylation | K2135 | -0.740 | -1.214 | _VLSLDTNITNQVNK(gl)LNR_ |
| POLH | Ubiquitylation | K70 | -0.166 | _SMWADDAKK(gl)_ | |
| POLH | Ubiquitylation | K91 | -0.322 | _ANLTK(gl)YR_ | |
| POLH | Ubiquitylation | K328 | -0.315 | _NFPGK(gl)TALATR_ | |
| POLH | Ubiquitylation | K682 | -1.530 | -1.226 | _SFLQPHSSNPQVVSAVSHQGK(gl)R_ |
| RFC3 | Ubiquitylation | K66 | -1.522 | _ELYGVGVEK(gl)LR_ | |
| RFC3 | Ubiquitylation | K80 | -1.498 | -2.261 | _IEHQTITTPSKK(gl)_ |
| RFC3 | Ubiquitylation | K154 | -1.667 | -0.110 | _TMEK(gl)YMSTCR_ |
| RFC3 | Ubiquitylation | K170 | -1.470 | -0.431 | _LILCCNSTSK(gl)VIPPIR_ |
| RFC3 | Ubiquitylation | K202 | -0.332 | -0.849 | _K(gl)EGLNLPSQLAHR_ |
| RFC3 | Ubiquitylation | K225 | -0.218 | _K(gl)ALLMCEACR_ | |
| SIRT1 | Phosphorylation | S14 | -0.369 | -0.246 | _(ac)ADEAALALQPGGS(ph)PSAAGADR_ |
| SIRT1 | Phosphorylation | S16 | -0.306 | -1.665 | _(ac)ADEAALALQPGGS(ph)PS(ph)AAGADREAASSPAGEPLR_ |
| SIRT1 | Phosphorylation | S26 | -1.047 | -0.245 | _EAAS(ph)SPAGEPLR_ |
| SIRT1 | Phosphorylation | S27 | 0.351 | -0.363 | _EAASS(ph)PAGEPLR_ |
| SIRT1 | Phosphorylation | S47 | -0.574 | -0.607 | _S(ph)PGEPGGAAPER_ |
| SIRT1 | Ubiquitylation | K238 | -1.641 | _RK(gl)DINTIEDAVK_ | |
| SIRT1 | Ubiquitylation | K499 | -2.138 | -0.204 | _LGGEYAK(gl)LCCNPVK_ |
| SIRT1 | Ubiquitylation | K578 | -2.782 | _GCMEEK(gl)PQEVQTSR_ | |
| SIRT1 | Ubiquitylation | K601 | -3.051 | _NVESIAEQMENPDLK(gl)NVGSSTGEK_ | |
| WRN | Ubiquitylation | K134 | 0.717 | _MLLENKAVK(gl)_ | |
| WRN | Phosphorylation | S1133 | 0.363 | 0.023 | _SIMVQS(ph)PEK_ |
| WRNIP1 | Ubiquitylation | K62 | -1.792 | _AK(gl)GPSPPGAK_ | |
| WRNIP1 | Phosphorylation | S65 | 0.168 | -0.233 | _AKGPS(ph)PPGAK_ |
| WRNIP1 | Ubiquitylation | K70 | -0.818 | _AKGPSPPGAK(gl)R_ | |
| WRNIP1 | Phosphorylation | S75 | 1.158 | 1.190 | _RLS(ph)ESSALK_ |
| WRNIP1 | Phosphorylation | S77 | 1.308 | _RLSES(ph)SALK_ | |
| WRNIP1 | Phosphorylation | S92 | -1.354 | _QPATPTAAESS(ph)EGEGEEGDDGGETESR_ | |
| WRNIP1 | Phosphorylation | T116 | 0.306 | -0.594 | _ESYDAPPT(ph)PSGAR_ |
| WRNIP1 | Phosphorylation | S153 | 0.097 | 0.198 | _RPAAAAAAGSAS(ph)PR_ |
| WRNIP1 | Ubiquitylation | K286 | -0.301 | _TTLAHIIASNSK(gl)K_ | |
| WRNIP1 | Ubiquitylation | K287 | 0.038 | -0.307 | _TTLAHIIASNSKK(gl)_ |
| WRNIP1 | Ubiquitylation | K301 | -0.013 | 0.247 | _FVTLSATNAK(gl)TNDVR_ |
| WRNIP1 | Ubiquitylation | K310 | -0.143 | -0.318 | _TNDVRDVIK(gl)QAQNEK_ |
| WRNIP1 | Ubiquitylation | K316 | -0.017 | -0.193 | _QAQNEK(gl)SFFK_ |
| WRNIP1 | Ubiquitylation | K482 | 0.152 | 0.133 | _VLITENDVK(gl)EGLQR_ |
| WRNIP1 | Ubiquitylation | K601 | 0.465 | _SIEVYSAYNNVK(gl)ACLR_ | |
| WRNIP1 | Ubiquitylation | K627 | -0.257 | -0.631 | _LMK(gl)DLGYGK_ |
| WRNIP1 | Ubiquitylation | K633 | 0.181 | -0.910 | _DLGYGK(gl)GYK_ |
| WRNIP1 | Ubiquitylation | K636 | -1.995 | _GYK(gl)YNPMYSEPVDQEYLPEELR_ | |
| WRNIP1 | Ubiquitylation | K661 | -0.239 | -0.645 | _GVDFFK(gl)QR_ |
.
© Copyright Svejstrup Laboratory 2015