bioLOGIC Category
Results for the Category
mRNA decay complex (UPF1, UPF2, UPF3B, DCP2, XRN1, XRN2, EXOSC2, EXOSC4, EXOSC10, PARN)
(822)
RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
W |
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|
Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
UPF1
|
0
|
|
|
-0.362
|
-0.954
|
-0.781
|
-0.966
|
-0.333
|
XRN2
|
0
|
1.050
|
-0.930
|
-2.506
|
-1.121
|
-0.161
|
-0.293
|
-0.304
|
XRN1
|
0
|
1.680
|
-1.120
|
|
|
|
|
|
XRN1
|
0
|
1.680
|
-1.120
|
-0.304
|
|
|
-0.943
|
0.164
|
UPF3B
|
0
|
-0.820
|
0.890
|
|
|
|
-0.652
|
-0.447
|
EXOSC2
|
0
|
-0.410
|
0.130
|
-0.167
|
0.162
|
0.416
|
-0.803
|
0.148
|
PARN
|
0
|
-1.190
|
1.560
|
|
0.653
|
-0.013
|
-0.219
|
0.283
|
UPF2
|
0
|
0.020
|
-0.140
|
|
|
|
-0.668
|
-0.131
|
EXOSC10
|
0
|
0.160
|
-0.170
|
|
-0.327
|
-0.108
|
-0.734
|
-0.003
|
Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
EXOSC10
|
Ubiquitylation
|
K591
|
|
-1.148
|
_SEVAAGVK(gl)K_
|
EXOSC10
|
Ubiquitylation
|
K592
|
|
-1.148
|
_SEVAAGVK(gl)K_
|
EXOSC10
|
Ubiquitylation
|
K680
|
|
-1.926
|
_GPLTVAQKK(gl)_
|
EXOSC10
|
Ubiquitylation
|
K710
|
|
-1.867
|
_APVSQAAK(gl)FDPSTK_
|
EXOSC10
|
Ubiquitylation
|
K716
|
|
-2.215
|
_FDPSTK(gl)IYEISNR_
|
EXOSC2
|
Ubiquitylation
|
K70
|
|
-0.209
|
_LICVK(gl)ALK_
|
EXOSC2
|
Ubiquitylation
|
K97
|
|
0.060
|
_WK(gl)VETNSR_
|
EXOSC2
|
Phosphorylation
|
S175
|
-0.346
|
-0.185
|
_LGQGVLVQVS(ph)PSLVK_
|
EXOSC2
|
Ubiquitylation
|
K180
|
|
-0.618
|
_LGQGVLVQVSPSLVK(gl)R_
|
PARN
|
Phosphorylation
|
S557
|
0.812
|
0.283
|
_NNS(ph)FTAPSTVGK_
|
PARN
|
Phosphorylation
|
S619
|
0.501
|
0.675
|
_KELS(ph)PAGSISK_
|
UPF1
|
Ubiquitylation
|
K321
|
|
0.611
|
_LK(gl)ESQTQDNITVR_
|
UPF1
|
Ubiquitylation
|
K340
|
-1.693
|
|
_WDLGLNKK(gl)_
|
UPF1
|
Ubiquitylation
|
K378
|
-1.658
|
|
_YK(gl)GDLAPLWK_
|
UPF1
|
Ubiquitylation
|
K638
|
-2.024
|
-0.456
|
_LAK(gl)MQFR_
|
UPF1
|
Ubiquitylation
|
K790
|
0.647
|
0.880
|
_ITTK(gl)LLK_
|
UPF1
|
Ubiquitylation
|
K793
|
-2.075
|
|
_LLK(gl)AGAKPDQIGIITPYEGQR_
|
UPF1
|
Phosphorylation
|
S1107
|
0.100
|
0.763
|
_SQIDVALS(ph)QDSTYQGER_
|
UPF3B
|
Ubiquitylation
|
K196
|
0.208
|
|
_K(gl)TTPLLSFLK_
|
XRN1
|
Phosphorylation
|
S814
|
|
-0.523
|
_ENEVQSSHHGEPPSEEHLS(ph)PQSFAM(ox)K_
|
XRN2
|
Ubiquitylation
|
K132
|
|
0.183
|
_EGMEAAVEK(gl)QR_
|
XRN2
|
Phosphorylation
|
T439
|
-0.332
|
-1.539
|
_RDQPAFTPSGILT(ph)PHALGSR_
|
XRN2
|
Phosphorylation
|
S448
|
0.425
|
0.037
|
_NS(ph)PGSQVASNPR_
|
XRN2
|
Phosphorylation
|
S473
|
0.104
|
-0.751
|
_MQNNSSPS(ph)ISPNTSFTSDGSPSPLGGIK_
|
XRN2
|
Phosphorylation
|
S475
|
|
0.436
|
_MQNNSSPSIS(ph)PNTSFTSDGSPSPLGGIK_
|
XRN2
|
Ubiquitylation
|
K493
|
-1.223
|
|
_MQNNSSPSISPNTSFTSDGSPSPLGGIK(gl)R_
|
XRN2
|
Phosphorylation
|
S499
|
-1.444
|
|
_AEDS(ph)DSEPEPEDNVR_
|
XRN2
|
Ubiquitylation
|
K533
|
0.431
|
|
_NKFDVDAADEK(gl)FR_
|
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