bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
TNF-alpha/NF-kappa B signaling complex (CHUK, BTRC, NFKB2, PPP6C, REL, CUL1, IKBKE, SAPS2, SAPS1, ANKRD28, RELA, SKP1)
(5196)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
CUL1 1 0.630 -0.610 -0.314 0.662 2.069 0.342 0.118
NFKB2 0 1.750 -0.820
PPP6R2 0 0.670 -0.870 -2.317 -0.790
PPP6R1 0 0.090 -0.500 -0.409 -0.832 -0.048 -1.875
SKP1 0 1.470 -0.970 -1.305 -0.243 -0.093 0.054
SKP1 0 1.470 -0.970 -0.472
PPP6C 0 0.340 -0.620 0.715 -0.944 -0.116 0.577
IKBKE 0
TBK1 0
BTRC 0 -0.780 0.690 0.532 -1.791 0.313
RELA 0 -1.130 1.600 0.793
ANKRD28 0 0.280 -0.110 -1.126 -0.485 -0.670
CHUK 0 -0.480

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
ANKRD28 Phosphorylation S1011 0.619 0.369 _TVS(ph)FEALPIMR_
BTRC Ubiquitylation K466 0.325 _IVSGAYDGKIK(gl)_
CHUK Ubiquitylation K296 -1.637 _GGPVDLTLK(gl)QPR_
CUL1 Ubiquitylation K262 0.119 _ESTEFLQQNPVTEYMK(gl)K_
CUL1 Ubiquitylation K263 0.119 -0.055 _ESTEFLQQNPVTEYMK(gl)K_
CUL1 Ubiquitylation K410 0.250 0.326 _FINNNAVTK(gl)MAQSSSK_
CUL1 Ubiquitylation K417 0.761 _MAQSSSK(gl)SPELLAR_
CUL1 Ubiquitylation K468 1.237 _FYAK(gl)MLAK_
CUL1 Ubiquitylation K503 0.665 _QACGFEYTSK(gl)LQR_
CUL1 Ubiquitylation K769 0.292 _VDGEK(gl)DTYSYLA_
IKBKE Ubiquitylation K137 -0.689 _DIK(gl)PGNIMR_
NFKB2 Ubiquitylation K741 -2.393 _GHTPLDLTCSTK(gl)VK_
NFKB2 Ubiquitylation K743 -0.624 _GHTPLDLTCSTKVK(gl)_
PPP6C Ubiquitylation K25 -0.474 _YLPENDLK(gl)R_
PPP6R1 Ubiquitylation K190 -0.812 _QDVVNWLNEEK(gl)IVQR_
PPP6R1 Ubiquitylation K480 -1.674 _VAGALVQNTEK(gl)GPNAEQLR_
PPP6R1 Phosphorylation S759 -1.430 -1.512 _VSGEEELHTGPPAPQGPLSVPQGLPTQSLAS(ph)PPAR_
SKP1 Ubiquitylation K130 0.138 0.140 _GK(gl)TPEEIRK_
SKP1 Phosphorylation T131 -0.024 -0.138 _GKT(ph)PEEIRK_
SKP1 Ubiquitylation K142 0.165 0.894 _TFNIK(gl)NDFTEEEEAQVRK_
SKP1 Ubiquitylation K155 -0.096 0.069 _K(gl)ENQWCEEK_
SKP1 Ubiquitylation K163 0.109 -0.020 _ENQWCEEK(gl)_
TBK1 Ubiquitylation K137 -0.689 _DIK(gl)PGNIMR_


© Copyright Svejstrup Laboratory 2015