bioLOGIC Category
Results for the Category
TNF-alpha/NF-kappa B signaling complex (CHUK, BTRC, NFKB2, PPP6C, REL, CUL1, IKBKE, SAPS2, SAPS1, ANKRD28, RELA, SKP1)
(5196)
RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
W |
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Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
CUL1
|
1
|
0.630
|
-0.610
|
-0.314
|
0.662
|
2.069
|
0.342
|
0.118
|
NFKB2
|
0
|
1.750
|
-0.820
|
|
|
|
|
|
PPP6R2
|
0
|
0.670
|
-0.870
|
|
-2.317
|
-0.790
|
|
|
PPP6R1
|
0
|
0.090
|
-0.500
|
-0.409
|
-0.832
|
-0.048
|
|
-1.875
|
SKP1
|
0
|
1.470
|
-0.970
|
|
-1.305
|
-0.243
|
-0.093
|
0.054
|
SKP1
|
0
|
1.470
|
-0.970
|
-0.472
|
|
|
|
|
PPP6C
|
0
|
0.340
|
-0.620
|
0.715
|
-0.944
|
-0.116
|
|
0.577
|
IKBKE
|
0
|
|
|
|
|
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TBK1
|
0
|
|
|
|
|
|
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BTRC
|
0
|
-0.780
|
0.690
|
0.532
|
|
|
-1.791
|
0.313
|
RELA
|
0
|
-1.130
|
1.600
|
0.793
|
|
|
|
|
ANKRD28
|
0
|
0.280
|
-0.110
|
|
-1.126
|
-0.485
|
|
-0.670
|
CHUK
|
0
|
|
|
-0.480
|
|
|
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|
Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
ANKRD28
|
Phosphorylation
|
S1011
|
0.619
|
0.369
|
_TVS(ph)FEALPIMR_
|
BTRC
|
Ubiquitylation
|
K466
|
|
0.325
|
_IVSGAYDGKIK(gl)_
|
CHUK
|
Ubiquitylation
|
K296
|
|
-1.637
|
_GGPVDLTLK(gl)QPR_
|
CUL1
|
Ubiquitylation
|
K262
|
0.119
|
|
_ESTEFLQQNPVTEYMK(gl)K_
|
CUL1
|
Ubiquitylation
|
K263
|
0.119
|
-0.055
|
_ESTEFLQQNPVTEYMK(gl)K_
|
CUL1
|
Ubiquitylation
|
K410
|
0.250
|
0.326
|
_FINNNAVTK(gl)MAQSSSK_
|
CUL1
|
Ubiquitylation
|
K417
|
|
0.761
|
_MAQSSSK(gl)SPELLAR_
|
CUL1
|
Ubiquitylation
|
K468
|
1.237
|
|
_FYAK(gl)MLAK_
|
CUL1
|
Ubiquitylation
|
K503
|
|
0.665
|
_QACGFEYTSK(gl)LQR_
|
CUL1
|
Ubiquitylation
|
K769
|
0.292
|
|
_VDGEK(gl)DTYSYLA_
|
IKBKE
|
Ubiquitylation
|
K137
|
|
-0.689
|
_DIK(gl)PGNIMR_
|
NFKB2
|
Ubiquitylation
|
K741
|
|
-2.393
|
_GHTPLDLTCSTK(gl)VK_
|
NFKB2
|
Ubiquitylation
|
K743
|
-0.624
|
|
_GHTPLDLTCSTKVK(gl)_
|
PPP6C
|
Ubiquitylation
|
K25
|
|
-0.474
|
_YLPENDLK(gl)R_
|
PPP6R1
|
Ubiquitylation
|
K190
|
|
-0.812
|
_QDVVNWLNEEK(gl)IVQR_
|
PPP6R1
|
Ubiquitylation
|
K480
|
|
-1.674
|
_VAGALVQNTEK(gl)GPNAEQLR_
|
PPP6R1
|
Phosphorylation
|
S759
|
-1.430
|
-1.512
|
_VSGEEELHTGPPAPQGPLSVPQGLPTQSLAS(ph)PPAR_
|
SKP1
|
Ubiquitylation
|
K130
|
0.138
|
0.140
|
_GK(gl)TPEEIRK_
|
SKP1
|
Phosphorylation
|
T131
|
-0.024
|
-0.138
|
_GKT(ph)PEEIRK_
|
SKP1
|
Ubiquitylation
|
K142
|
0.165
|
0.894
|
_TFNIK(gl)NDFTEEEEAQVRK_
|
SKP1
|
Ubiquitylation
|
K155
|
-0.096
|
0.069
|
_K(gl)ENQWCEEK_
|
SKP1
|
Ubiquitylation
|
K163
|
0.109
|
-0.020
|
_ENQWCEEK(gl)_
|
TBK1
|
Ubiquitylation
|
K137
|
|
-0.689
|
_DIK(gl)PGNIMR_
|
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