bioLOGIC Category
Results for the Category
RNA polymerase II complex, chromatin structure modifying
(3065)
RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
W |
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Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
SMARCD3
|
2
|
0.790
|
-0.310
|
0.206
|
|
|
1.501
|
1.642
|
SMARCB1
|
1
|
0.850
|
-0.060
|
0.041
|
-0.003
|
0.699
|
0.354
|
-0.731
|
SMARCB1
|
1
|
0.850
|
-0.060
|
|
0.738
|
1.594
|
|
|
SMARCD2
|
1
|
1.610
|
-1.190
|
0.105
|
0.359
|
0.644
|
0.148
|
0.282
|
SMARCE1
|
0
|
-0.270
|
0.280
|
0.341
|
|
|
|
|
SMARCE1
|
0
|
-0.270
|
0.280
|
|
0.251
|
0.796
|
0.284
|
0.349
|
CCNC
|
0
|
0.760
|
-0.860
|
|
|
|
|
|
ACTL6A
|
0
|
1.180
|
-1.200
|
-0.232
|
-0.204
|
0.672
|
-0.015
|
0.126
|
SMARCC2
|
0
|
-0.770
|
0.630
|
|
|
|
|
|
SMARCC2
|
0
|
-0.770
|
0.630
|
0.151
|
0.139
|
0.622
|
0.709
|
0.505
|
SMARCC1
|
0
|
0.140
|
0.090
|
0.553
|
0.112
|
0.584
|
0.137
|
0.136
|
Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
ACTL6A
|
Phosphorylation
|
S233
|
|
0.000
|
_EGS(ph)PANWK_
|
ACTL6A
|
Ubiquitylation
|
K238
|
|
-0.635
|
_EGSPANWK(gl)R_
|
ACTL6A
|
Ubiquitylation
|
K242
|
|
-0.676
|
_EK(gl)LPQVTR_
|
ACTL6A
|
Ubiquitylation
|
K371
|
|
-0.788
|
_ELSQK(gl)TPPSMR_
|
ACTL6A
|
Ubiquitylation
|
K379
|
0.076
|
-0.470
|
_LK(gl)LIANNTTVER_
|
CCNC
|
Ubiquitylation
|
K117
|
|
0.126
|
_LIAAATSVLK(gl)TR_
|
SMARCB1
|
Ubiquitylation
|
K13
|
0.411
|
-0.949
|
_TFGQK(gl)PVK_
|
SMARCB1
|
Ubiquitylation
|
K208
|
|
-0.170
|
_LDMEIDGQK(gl)LR_
|
SMARCC1
|
Phosphorylation
|
S310
|
-0.047
|
0.123
|
_NEEPVRS(ph)PERR_
|
SMARCC1
|
Phosphorylation
|
S328
|
-0.755
|
-0.358
|
_KHS(ph)PS(ph)PPPPTPTESR_
|
SMARCC1
|
Phosphorylation
|
S330
|
-0.755
|
-1.491
|
_KHS(ph)PS(ph)PPPPTPTESR_
|
SMARCC1
|
Ubiquitylation
|
K588
|
-0.831
|
|
_SPQVPAAQQMLNFPEK(gl)NK_
|
SMARCC1
|
Ubiquitylation
|
K590
|
-0.737
|
|
_NK(gl)EKPVDLQNFGLR_
|
SMARCC1
|
Ubiquitylation
|
K592
|
-0.509
|
|
_EK(gl)PVDLQNFGLR_
|
SMARCC1
|
Ubiquitylation
|
K608
|
-0.342
|
0.588
|
_TDIYSK(gl)K_
|
SMARCC1
|
Ubiquitylation
|
K609
|
-0.053
|
0.520
|
_TDIYSKK(gl)_
|
SMARCC1
|
Ubiquitylation
|
K716
|
0.001
|
|
_VASAAAK(gl)AALEEFSR_
|
SMARCC1
|
Ubiquitylation
|
K882
|
0.402
|
|
_AK(gl)HLAAVEER_
|
SMARCC2
|
Ubiquitylation
|
K161
|
-0.199
|
|
_LKDIIK(gl)R_
|
SMARCC2
|
Phosphorylation
|
S283
|
0.602
|
0.869
|
_TLTDEVNS(ph)PDSDRR_
|
SMARCC2
|
Phosphorylation
|
S302
|
-0.755
|
-0.668
|
_RS(ph)PSPSPTPEAK_
|
SMARCC2
|
Phosphorylation
|
S347
|
-0.627
|
-0.862
|
_DMDEPS(ph)PVPNVEEVTLPK_
|
SMARCC2
|
Ubiquitylation
|
K455
|
-0.775
|
|
_ALPEFFNGKNK(gl)_
|
SMARCC2
|
Ubiquitylation
|
K694
|
0.389
|
|
_VASAAAK(gl)SALEEFSK_
|
SMARCC2
|
Ubiquitylation
|
K872
|
-0.712
|
|
_DIGEGNLSTAAAAALAAAAVK(gl)AK_
|
SMARCC2
|
Ubiquitylation
|
K874
|
0.402
|
|
_AK(gl)HLAAVEER_
|
SMARCC2
|
Ubiquitylation
|
K902
|
0.641
|
0.460
|
_KLEIK(gl)LR_
|
SMARCD2
|
Ubiquitylation
|
K168
|
|
-1.058
|
_K(gl)LDQTIAR_
|
SMARCD2
|
Phosphorylation
|
S199
|
-0.485
|
|
_IYIS(ph)NTFSPSKAEGDSAGTAGTPGGTPAGDK_
|
SMARCD2
|
Phosphorylation
|
T217
|
1.626
|
0.539
|
_AEGDSAGTAGT(ph)PGGTPAGDK_
|
SMARCD2
|
Ubiquitylation
|
K237
|
-0.079
|
-1.110
|
_VEGK(gl)LLDDPSK_
|
SMARCD2
|
Ubiquitylation
|
K244
|
0.036
|
|
_LLDDPSK(gl)QK_
|
SMARCD2
|
Ubiquitylation
|
K246
|
0.036
|
|
_LLDDPSK(gl)QK_
|
SMARCD2
|
Ubiquitylation
|
K451
|
|
-0.755
|
_IHETIESINQLK(gl)TQR_
|
SMARCE1
|
Ubiquitylation
|
K92
|
0.706
|
|
_ASNPDLK(gl)LWEIGK_
|
SMARCE1
|
Ubiquitylation
|
K271
|
-0.418
|
-0.010
|
_FLESTDSFNNELK(gl)R_
|
© Copyright Svejstrup Laboratory 2015