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Query: YKT6

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
YKT6 0 -0.913 0.160 -0.380

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
YKT6 Phosphorylation S114 -1.569 _IDWPVGS(ph)PATIHYPALDGHLSR_
YKT6 Ubiquitylation K103 0.656 _VLDEFSK(gl)QVDR_
YKT6 Ubiquitylation K141 -0.073 _EADPMTK(gl)VQAELDETK_

Background Information for YKT6:


Pubmed-YKT6 »
Uniprot-YKT6 »
Biogrid-YKT6 »
ProteomicsDB-YKT6 »

Tumorportal-YKT6 »
COSMIC-YKT6 »
GenomeRNAi-YKT6 »
Genecards-YKT6


Protein-protein Interactions for YKT6
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ARL6IP6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CHRNA9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FNTB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RABGGTA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RABGGTB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TAS2R41 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait YKT6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in YKT6
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Longin-like_dom IPR011012 0.34
Category members Synaptobrevin IPR001388 0
Category members Longin_dom IPR010908 0


Protein complexes (CORUM database) featuring YKT6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring YKT6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members Pathway Pathway_1261 KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT 0 1.52
Category members GO Category GO:0016192 vesicle-mediated transport Database 1.1
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0030659 cytoplasmic vesicle membrane Database 0.62
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0006904 vesicle docking involved in exocytosis Database 0.51
Category members GO Category GO:0031201 SNARE complex Database 0.49
Category members GO Category GO:0005768 endosome Database 0.29
Category members GO Category GO:0006888 ER to Golgi vesicle-mediated transport Database 0.28
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0042147 retrograde transport, endosome to Golgi Database 0.26
Category members GO Category GO:0005484 SNAP receptor activity Database 0.2
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0006903 vesicle targeting Database 0
Category members GO Category GO:0019706 protein-cysteine S-palmitoyltransferase activity Database 0


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