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Query: RAD51B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RAD51B 0 1.718 -1.570 1.980

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RAD51B Ubiquitylation K71 -0.262 _MQTAYGIK(gl)AQR_

Background Information for RAD51B:


Pubmed-RAD51B »
Uniprot-RAD51B »
Biogrid-RAD51B »
ProteomicsDB-RAD51B »

Tumorportal-RAD51B »
COSMIC-RAD51B »
GenomeRNAi-RAD51B »
Genecards-RAD51B


Protein-protein Interactions for RAD51B
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in RAD51B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members AAA+_ATPase IPR003593 0.38
Category members DNA_repair_Rad51/TF_NusA_a-hlx IPR010995 0.23
Category members DNA_recomb/repair_RecA IPR013765 0.04
Category members DNA_recomb/repair_RecA-like IPR016467 0.04
Category members DNA_helicase_DnaB-like_C IPR007694 0
Category members DNA_recomb/repair_Rad51_C IPR013632 0
Category members Circ_KaiC/RadA IPR014774 0
Category members RecA_ATP-bd IPR020588 0


Protein complexes (CORUM database) featuring RAD51B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 251 BCDX2 complex Database 0
Category members Corum 256 RAD51B-RAD51C complex Database 0
Category members Corum 258 BCDX2 complex Database 0
Category members Corum 260 RAD51B-RAD51C complex Database 0
Category members Corum 261 RAD51B-RAD51C-RAD51D-XRCC2-XRCC3 complex Database 0
Category members Corum 68 BCDX2 complex Database 0


Categories featuring RAD51B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0006281 DNA repair Database INF
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0003697 single-stranded DNA binding Database 4.24
Category members GO Category GO:0006260 DNA replication Database 3.34
Category members GO Category GO:0006310 DNA recombination Database 3.14
Category members GO Category GO:0008094 DNA-dependent ATPase activity Database 2.31
Category members GO Category GO:0003678 DNA helicase activity Database 2.22
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0017111 nucleoside-triphosphatase activity Database 0.5
Category members Pathway Pathway_53 REACTOME_HEMOSTASIS 0 0.4
Category members GO Category GO:0007596 blood coagulation Database 0.4
Category members Pathway Pathway_343 KEGG_HOMOLOGOUS_RECOMBINATION 0 0.12
Category members Pathway Pathway_385 REACTOME_FACTORS_INVOLVED_IN_MEGAKARYOCYTE_DEVELOPMENT_AND_PLATELET_PRODUCTION 0 0.07
Category members GO Category GO:0009432 SOS response Database 0.04
Category members Disease phenotype LEIOMYOMA_UTERINE LEIOMYOMA UTERINE Database 0
Category members GO Category GO:0006259 DNA metabolic process Database 0
Category members GO Category GO:0007131 reciprocal meiotic recombination Database 0


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