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CRD-mediated mRNA stability complex
(GO:0070937)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
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Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
YBX1 2 -0.180 -0.010 -0.197 -0.190 -1.344 -0.617
HNRNPU 2 0.060 -0.680 -0.343 -0.601 -0.104
HNRNPU 2 0.060 -0.680 -0.369 0.066 -0.683 -0.285
IGF2BP1 2 0.480 -0.920 -0.339 0.012 0.258 -0.196 0.244
CSDE1 1 0.850 -0.360 0.302 -1.033 -0.820 -0.426 -0.036
SYNCRIP 0 -1.170 2.050
SYNCRIP 0 -1.170 2.050 0.328 -0.116 0.051
DHX9 0 0.160 -0.600 -0.456 -0.799 -0.169

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
CSDE1 Ubiquitylation K127 -1.399 -0.753 _TGK(gl)PIAVK_
CSDE1 Ubiquitylation K132 -0.229 _TGKPIAVK(gl)LVK_
CSDE1 Ubiquitylation K137 -0.951 _IK(gl)QEILPEER_
CSDE1 Ubiquitylation K285 -0.577 1.525 _NGK(gl)EVATDVR_
CSDE1 Ubiquitylation K323 -2.005 -1.398 _VPSK(gl)NQNDPLPGR_
CSDE1 Ubiquitylation K334 -0.130 _IK(gl)VDFVIPK_
CSDE1 Ubiquitylation K353 0.281 _SK(gl)VTLLEGDHVR_
CSDE1 Ubiquitylation K410 0.593 _DGFGFIK(gl)CVDR_
CSDE1 Phosphorylation S560 -0.057 0.159 _LLGRNS(ph)NSK_
CSDE1 Ubiquitylation K694 0.626 _GDCLQK(gl)GESVK_
CSDE1 Ubiquitylation K743 -1.247 _DQFGFINYEVGDSKK(gl)_
CSDE1 Ubiquitylation K775 -0.518 1.078 _TGK(gl)CSACNVWR_
CSDE1 Ubiquitylation K789 -1.573 _VCEGPK(gl)AVAAPRPDR_
CSDE1 Ubiquitylation K804 -0.486 -0.563 _LK(gl)NITLDDASAPR_
DHX9 Ubiquitylation K16 0.349 _K(gl)MTPSYEIR_
DHX9 Phosphorylation S87 -3.262 -3.196 _SEEVPAFGVAS(ph)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK_
DHX9 Phosphorylation T97 -2.744 _SEEVPAFGVASPPPLTDTPDT(ph)TANAEGDLPTTM(ox)GGPLPPHLALK_
DHX9 Ubiquitylation K146 0.085 0.291 _GANLK(gl)DYYSR_
DHX9 Ubiquitylation K191 -0.896 -0.427 _LNQYFQK(gl)EK_
DHX9 Ubiquitylation K193 -0.204 _LNQYFQK(gl)EK_
DHX9 Ubiquitylation K467 0.273 0.693 _GEEPGK(gl)SCGYSVR_
DHX9 Ubiquitylation K497 0.228 -0.210 _K(gl)LEAGIR_
DHX9 Ubiquitylation K857 -0.156 -0.205 _ILAK(gl)LPIEPR_
DHX9 Ubiquitylation K1024 0.044 -0.110 _NALIHK(gl)SSVNCPFSSQDMK_
DHX9 Ubiquitylation K1037 0.034 _SSVNCPFSSQDMK(gl)YPSPFFVFGEK_
HNRNPU Phosphorylation S3 0.613 0.694 _(ac)SS(ph)SPVNVKK_
HNRNPU Phosphorylation S4 0.604 0.436 _SSS(ph)PVNVK_
HNRNPU Ubiquitylation K10 -0.601 0.483 _(ac)SSSPVNVKK(gl)_
HNRNPU Ubiquitylation K17 0.825 _VSELK(gl)EELKK_
HNRNPU Ubiquitylation K21 0.440 _VSELKEELK(gl)K_
HNRNPU Ubiquitylation K22 0.251 _VSELKEELKK(gl)_
HNRNPU Ubiquitylation K28 0.318 _LSDK(gl)GLKAELMER_
HNRNPU Ubiquitylation K31 -0.073 _GLK(gl)AELMER_
HNRNPU Phosphorylation S59 -0.339 0.750 _LQAALDDEEAGGRPAMEPGNGS(ph)LDLGGDSAGR_
HNRNPU Ubiquitylation K186 -0.973 -0.548 _EAAGK(gl)SSGPTSLFAVTVAPPGAR_
HNRNPU Ubiquitylation K265 1.012 1.954 _GYFEYIEENK(gl)YSR_
HNRNPU Phosphorylation S271 -0.442 -0.479 _AKS(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK_
HNRNPU Phosphorylation T286 -0.661 _AKSPQPPVEEEDEHFDDT(ph)VVCLDTYNCDLHFK_
HNRNPU Ubiquitylation K331 1.838 _ASYGVSK(gl)GK_
HNRNPU Ubiquitylation K333 0.588 1.107 _GK(gl)VCFEMK_
HNRNPU Ubiquitylation K464 -2.351 _EK(gl)PYFPIPEEYTFIQNVPLEDR_
HNRNPU Ubiquitylation K516 0.760 0.963 _TTWVTK(gl)HAAENPGK_
HNRNPU Ubiquitylation K524 1.526 1.808 _HAAENPGK(gl)YNILGTNTIMDK_
HNRNPU Ubiquitylation K543 0.423 _MMVAGFK(gl)K_
HNRNPU Ubiquitylation K544 0.990 0.998 _K(gl)QMADTGKLNTLLQR_
HNRNPU Ubiquitylation K551 0.793 _QMADTGK(gl)LNTLLQR_
HNRNPU Ubiquitylation K565 -0.860 0.512 _APQCLGK(gl)FIEIAAR_
HNRNPU Ubiquitylation K602 0.540 _K(gl)AVVVCPK_
HNRNPU Ubiquitylation K609 0.190 _AVVVCPK(gl)DEDYKQR_
HNRNPU Ubiquitylation K635 -0.542 0.731 _DLPEHAVLK(gl)MK_
HNRNPU Ubiquitylation K670 0.028 0.169 _LLEQYK(gl)EESK_
HNRNPU Ubiquitylation K674 0.609 1.144 _LLEQYKEESK(gl)K_
HNRNPU Ubiquitylation K675 1.046 _LLEQYKEESKK(gl)_
IGF2BP1 Ubiquitylation K66 0.468 0.007 _VELQGK(gl)R_
IGF2BP1 Phosphorylation S181 0.145 0.078 _QGS(ph)PVAAGAPAK_
IGF2BP1 Ubiquitylation K190 -2.143 -1.004 _QGSPVAAGAPAK(gl)QQQVDIPLR_
IGF2BP1 Ubiquitylation K272 -1.062 -0.765 _DTK(gl)TADEVPLK_
IGF2BP1 Ubiquitylation K294 -0.976 0.052 _LIGK(gl)EGR_
IGF2BP1 Ubiquitylation K300 -0.107 _NLK(gl)KVEQDTETK_
IGF2BP1 Phosphorylation S313 0.221 _ITIS(ph)SLQDLTLYNPER_
IGF2BP1 Phosphorylation S314 0.255 _ITISS(ph)LQDLTLYNPER_
IGF2BP1 Ubiquitylation K330 0.912 0.577 _TITVK(gl)GAIENCCR_
IGF2BP1 Ubiquitylation K346 0.773 _AEQEIMKK(gl)_
IGF2BP1 Ubiquitylation K429 0.375 _GQHIK(gl)QLSR_
IGF2BP1 Ubiquitylation K440 -1.281 -1.065 _FASASIK(gl)IAPPETPDSK_
IGF2BP1 Ubiquitylation K450 -1.512 -1.678 _IAPPETPDSK(gl)VR_
IGF2BP1 Ubiquitylation K465 -0.956 -0.267 _MVIITGPPEAQFK(gl)AQGR_
IGF2BP1 Ubiquitylation K475 1.590 2.237 _LK(gl)EENFFGPK_
IGF2BP1 Ubiquitylation K561 -0.386 0.027 _DILAQVK(gl)QQHQK_
SYNCRIP Ubiquitylation K103 0.732 0.774 _SAFLCGVMK(gl)TYR_
SYNCRIP Ubiquitylation K111 -1.305 _QGTK(gl)VADSSKGPDEAK_
SYNCRIP Ubiquitylation K123 1.402 _VADSSKGPDEAK(gl)IK_
SYNCRIP Ubiquitylation K221 0.280 1.455 _EAAQEAVK(gl)LYNNHEIR_
SYNCRIP Ubiquitylation K313 1.171 0.697 _LMSGK(gl)VK_
SYNCRIP Ubiquitylation K315 -0.279 1.412 _LMSGKVK(gl)_
SYNCRIP Ubiquitylation K363 -0.725 -0.190 _AFSQFGK(gl)LER_
YBX1 Ubiquitylation K64 5.830 4.056 _VLGTVK(gl)WFNVR_
YBX1 Ubiquitylation K137 -0.751 0.084 _GAEAANVTGPGGVPVQGSK(gl)YAADR_
YBX1 Phosphorylation Y162 -0.210 _NYQQNY(ph)QNSESGEKNEGSESAPEGQAQQR_
YBX1 Phosphorylation S165 0.119 0.151 _NYQQNYQNS(ph)ESGEK_
YBX1 Ubiquitylation K170 -0.297 0.298 _NYQQNYQNSESGEK(gl)NEGSESAPEGQAQQR_
YBX1 Phosphorylation S174 0.041 0.228 _NEGS(ph)ESAPEGQAQQR_
YBX1 Phosphorylation S176 0.061 0.075 _NEGSES(ph)APEGQAQQR_
YBX1 Phosphorylation S209 0.658 -0.148 _RPQYS(ph)NPPVQGEVM(ox)EGADNQGAGEQGRPVR_


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