Results for the Category
co-SMAD binding
(GO:0070410)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| TRIM33 | 1 | -1.430 | 2.720 | -0.662 | -0.190 | 0.683 | 0.034 | 0.316 |
| USP9Y | 0 | 0.000 | -0.200 | -0.309 | 0.196 | 0.205 | -0.019 | 0.128 |
| USP9X | 0 | -0.520 | 0.800 | -0.309 | 0.196 | 0.205 | -0.019 | 0.128 |
| GATA4 | 0 | -0.670 | 0.350 | |||||
| SMAD3 | 0 | -1.560 | 1.800 | |||||
| SMAD3 | 0 | 0.270 | -0.340 | |||||
| SMAD2 | 0 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| GATA4 | Phosphorylation | S109 | -0.520 | -0.425 | _FS(ph)FPGTTGSLAAAAAAAAAR_ |
| GATA4 | Phosphorylation | S407 | -0.185 | 0.124 | _LS(ph)PQGYASPVSQSPQTSSK_ |
| SMAD2 | Phosphorylation | T8 | -0.896 | -0.885 | _(ac)SSILPFT(ph)PPVVK_ |
| SMAD2 | Ubiquitylation | K13 | -0.058 | _(ac)SSILPFTPPVVK(gl)R_ | |
| SMAD3 | Ubiquitylation | K13 | -0.704 | _(ac)SSILPFTPPIVK(gl)R_ | |
| TRIM33 | Ubiquitylation | K356 | 0.156 | _IKEVNETNK(gl)R_ | |
| TRIM33 | Ubiquitylation | K769 | 0.051 | _TSLSFK(gl)SDQVK_ | |
| USP9X | Ubiquitylation | K112 | 0.155 | 0.666 | _GLDVK(gl)SEACQR_ |
| USP9X | Ubiquitylation | K315 | 1.100 | _SLK(gl)NLASR_ | |
| USP9X | Ubiquitylation | K1045 | 0.212 | _VLMK(gl)LMPPDSTTIEK_ | |
| USP9X | Ubiquitylation | K1445 | -1.104 | -0.276 | _ELLAFQTSEK(gl)K_ |
| USP9X | Ubiquitylation | K1446 | -1.104 | 0.061 | _ELLAFQTSEKK(gl)_ |
| USP9X | Ubiquitylation | K1627 | -1.695 | _DDVFGYPQQFEDK(gl)PALSK_ | |
| USP9X | Ubiquitylation | K1637 | -0.957 | _TEDRK(gl)EYNIGVLR_ | |
| USP9X | Ubiquitylation | K1798 | -1.085 | _LPPVLAIQLK(gl)R_ | |
| USP9X | Ubiquitylation | K2301 | 0.210 | 0.500 | _IIEDCSNSEETVK(gl)LLR_ |
| USP9X | Ubiquitylation | K2480 | -0.335 | _ACELCPEEVKK(gl)_ | |
| USP9X | Phosphorylation | S2563 | -0.389 | -0.274 | _AQENYEGSEEVS(ph)PPQTK_ |
| USP9Y | Ubiquitylation | K112 | 0.155 | 0.666 | _GLDVK(gl)SEACQR_ |
| USP9Y | Ubiquitylation | K315 | 1.100 | _SLK(gl)NLASR_ | |
| USP9Y | Ubiquitylation | K1045 | 0.212 | _VLMK(gl)LMPPDSTTIEK_ | |
| USP9Y | Ubiquitylation | K1445 | -1.104 | -0.276 | _ELLAFQTSEK(gl)K_ |
| USP9Y | Ubiquitylation | K1446 | -1.104 | 0.061 | _ELLAFQTSEKK(gl)_ |
| USP9Y | Ubiquitylation | K1627 | -1.695 | _DDVFGYPQQFEDK(gl)PALSK_ | |
| USP9Y | Ubiquitylation | K1637 | -0.957 | _TEDRK(gl)EYNIGVLR_ | |
| USP9Y | Ubiquitylation | K1798 | -1.085 | _LPPVLAIQLK(gl)R_ | |
| USP9Y | Ubiquitylation | K2301 | 0.210 | 0.500 | _IIEDCSNSEETVK(gl)LLR_ |
| USP9Y | Ubiquitylation | K2480 | -0.335 | _ACELCPEEVKK(gl)_ | |
| USP9Y | Phosphorylation | S2563 | -0.389 | -0.274 | _AQENYEGSEEVS(ph)PPQTK_ |
.
© Copyright Svejstrup Laboratory 2015