RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
RUFY3	0	-0.950	0.590
RHOA	0	-0.510	1.370	-0.485			0.532	0.279
ARHGEF1	0	-0.170	0.400
PSEN1	0	0.930	-1.110
RTN4	0	0.530	-0.760		0.863		-1.844	-1.505
EPHB2	0	-0.630	0.780					0.221
EPHB2	0	-0.630	0.780
ARHGDIA	0	-0.150	-0.030	0.141				-2.525

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ARHGDIA	Phosphorylation	S24	-1.058	-0.942	_(ac)AEQEPTAEQLAQIAAENEEDEHS(ph)VNYKPPAQK_
ARHGDIA	Ubiquitylation	K52		0.380	_YK(gl)EALLGR_
ARHGDIA	Ubiquitylation	K99	0.365		_K(gl)QSFVLK_
ARHGDIA	Ubiquitylation	K127	1.141		_EIVSGMK(gl)YIQHTYR_
ARHGDIA	Ubiquitylation	K141	0.314	0.567	_IDK(gl)TDYM(ox)VGSYGPR_
ARHGDIA	Ubiquitylation	K167	-1.199		_AEEYEFLTPVEEAPK(gl)GMLAR_
ARHGDIA	Ubiquitylation	K178		0.739	_GSYSIK(gl)SR_
ARHGEF1	Phosphorylation	S863	-0.276	-0.053	_DGDGVPGGGPLS(ph)PAR_
EPHB2	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHB2	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHB2	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHB2	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHB2	Phosphorylation	S776	-0.147	-0.171	_FLEDDTS(ph)DPTYTSALGGK_
EPHB2	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHB2	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
RHOA	Ubiquitylation	K6	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K7	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K118	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K119	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K135	-0.528	-0.796	_MK(gl)QEPVKPEEGRDMANR_
RHOA	Ubiquitylation	K162	0.345	0.453	_IGAFGYMECSAK(gl)TK_
RTN4	Phosphorylation	S7		-1.343	_(ac)MEDLDQS(ph)PLVSSSDS(ph)PPRPQPAFK_
RTN4	Phosphorylation	S11	-0.625	-0.783	_(ac)MEDLDQSPLVS(ph)SSDSPPRPQPAFK_
RTN4	Phosphorylation	S13		-0.816	_(ac)MEDLDQSPLVSSS(ph)DSPPRPQPAFK_
RTN4	Phosphorylation	S15	-0.846	-0.788	_(ac)M(ox)EDLDQS(ph)PLVSSSDS(ph)PPRPQPAFK_
RTN4	Phosphorylation	S107		-1.749	_GPLPAAPPVAPERQPS(ph)WDPSPVSSTVPAPSPLSAAAVSPSK_
RTN4	Phosphorylation	S181	-0.061	-0.102	_RRGS(ph)SGSVDETLFALPAASEPVIR_
RTN4	Phosphorylation	S184	0.143	0.327	_GSSGS(ph)VDETLFALPAASEPVIR_
RTN4	Phosphorylation	T188	0.091	0.389	_RGSSGSVDET(ph)LFALPAASEPVIR_
RTN4	Phosphorylation	T856	0.863	0.955	_ET(ph)ETFSDSSPIEIIDEFPTLISSK_
RTN4	Ubiquitylation	K1174		0.266	_NVK(gl)DAMAK_
RUFY3	Phosphorylation	T4	-1.190	-1.051	_(ac)AET(ph)PPPPTAGAESCSEEPAR_